Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq3222 84.2 2e-11 >seq3222 Length=516221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/147 (74%), Gaps = 3/147 (2%) Strand=Plus/Plus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| |||| || || | |||||| |||| ||| ||||| || || ||||| ||| Sbjct 55181 TTAATCATGGTTCCACCCCGAAGCCTCAAAACCAGATGAAGTGTTGACTCCTTTTGGATG 55240 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 |||||||| | | ||| | |||||||||||| || || ||| |||| | ||||| Sbjct 55241 TTGTAATCAGCAAGAGTCCTCCCATCTTCCAATTGCTTCCCAGCAAAAATCAATCTCTGC 55300 Query 20090 TGATC-GACGGGCACGCCTTCTTTGTC 20115 ||||| | |||| | ||||| || || Sbjct 55301 TGATCAGGCGGG-ATTCCTTCCTTATC 55326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419427135481581