Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq6563 120 3e-22 seq8682 118 1e-21 seq9707 109 5e-19 seq10231 105 6e-18 seq6147 96.9 3e-15 >seq6563 Length=399665 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | ||| ||||||||||| | ||| || ||| || |||| | |||||| Sbjct 390154 ACCAGGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCC 390213 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| ||||| ||||||| | || ||||| || || || || ||||| ||||| | Sbjct 390214 AGCTGCTTTCCCGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGG 390273 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || |||||||| | | | ||||||| | || || |||| || ||||| ||| Sbjct 390274 ATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTCTTT 390333 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 390334 CCGGTGAGGGTCTTTACGAAGATCTGCAT 390362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| ||||| || ||| | ||| |||||||| || || Sbjct 389026 GTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCGTCCAGCTGCTTCCCT 389085 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | || ||||| || || || || || || ||||| | ||| || |||||| Sbjct 389086 GCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 389145 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | |||||| | | ||||| || | |||||||| || ||||| | || Sbjct 389146 ACATTATCAATAGTGTCCGAGCTCTCGACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTC 389205 Query 94991 TTCACAAAGATCTGCAT 95007 || |||||||||||||| Sbjct 389206 TTGACAAAGATCTGCAT 389222 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| || |||| |||| ||| | ||| | || |||||||| || | ||| ||||| Sbjct 389220 CATTCCACCCCTCAGACGCAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATC 389279 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | || | ||| || || || || ||| | || || | || ||||||||||| Sbjct 389280 TGCGAGGGTCCTACCATCTTCGAGTTGCTTCCCGGCGAAAATCAGCCTCTGCTGATCTGG 389339 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 ||||| || || ||||| | ||| |||||||| || | | ||||| | | || Sbjct 389340 GGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATTGTGTCCGAGCTCTC 389399 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | |||||||| || || ||||| || || || || |||||||| Sbjct 389400 CACTTCGAGGGTGATGGTCTTCCCTGTAAGGGTCTTAACGAAAATCTGCAT 389450 >seq8682 Length=358022 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | || || ||||| || | ||| || ||| || || | Sbjct 100639 CGCAAAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGCCCA 100698 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || |||||||| ||| ||||||| || || ||||||||||| ||||| || || ||| Sbjct 100699 TCTTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCCTCCTTG 100758 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || |||||||| | | | ||||| | | || || || | |||||| Sbjct 100759 TCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTTTCAACCTCCAATGTGATG 100818 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || || || ||||| |||||||| Sbjct 100819 GTCTTGCCAGTGAGGGTCTTAACAAAAATCTGCAT 100853 Score = 116 bits (128), Expect = 3e-21 Identities = 155/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 |||||| || | || || |||||||| | ||| |||||| || || ||| | ||| Sbjct 101328 CACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGG-CA-AGGGTTCGGCCGTCC 101385 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || ||| | ||||| | || ||||| || || || ||||| || ||||| Sbjct 101386 TCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCT 101445 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| || || ||||| ||| ||||||| | || || || | |||||||| Sbjct 101446 TGAATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTC 101505 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| ||||||||||||||||||||||| Sbjct 101506 TTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | || || ||||| || | ||| || ||| || || | Sbjct 100867 CGCAAAACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGTCCA 100926 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| |||||||| ||| ||||||| || || ||||| ||||| ||||| || || ||| Sbjct 100927 TCCTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTG 100986 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || || || || | | ||||| | || || || | |||||| Sbjct 100987 TCCTGAATCTTGGCTTTCACATTATCAATGGTGTCGGAACTTTCAACCTCCAAGGTGATG 101046 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || || || |||||||| ||||| Sbjct 101047 GTTTTTCCGGTGAGGGTCTTAACAAAGATTTGCAT 101081 Score = 102 bits (112), Expect = 7e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 |||||| || | ||||||||||| || | ||| |||||| || || ||| || || Sbjct 101100 CACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGG-CA-AGGGTTCGACCGTCT 101157 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || |||||||| || | ||||| | || ||||| ||||| || || || || || || Sbjct 101158 TCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCT 101217 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| || ||||| ||| | | ||||||| | || || |||| || |||||| Sbjct 101218 TGAATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTCTCAACCTCAAGGGTAATGGTT 101277 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || || || ||||||||||| Sbjct 101278 TTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 >seq9707 Length=1014798 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| |||||| | ||||| | ||||||||||| |||||||| ||||| ||| Sbjct 739886 TCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCGGGAGGAATTCCTTCCTTG 739827 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | ||| ||||| | || || |||| |||||| Sbjct 739826 TCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCACCTCAAGCGTGATC 739767 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || ||||||||||| Sbjct 739766 GTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 739732 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| || | ||| || ||||| || | |||||| ||| | || | || || Sbjct 739485 CACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCCGTCTTC 739426 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||||||| | ||||| | | ||||| || || || || ||||| ||||| | Sbjct 739425 GAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTG 739366 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| | ||| ||||| | | ||||| || | |||||||| || Sbjct 739365 GATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTT 739306 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || |||||||| ||||||||||| Sbjct 739305 GCCGGTTAGTGTTTTCACGAAGATCTGCAT 739276 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || |||||||||||| | ||||| | | ||||| || || ||||| || || ||| Sbjct 725413 TCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTG 725354 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| ||||| | | ||||| || | |||||| Sbjct 725353 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATG 725294 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||| ||||||||||| Sbjct 725293 GTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 725259 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| |||||| | ||||| | | ||||| || |||||||| || || ||| Sbjct 740342 TCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTG 740283 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | ||| ||||| | | ||||| || | ||||| Sbjct 740282 TCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATC 740223 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||||||||||||||| Sbjct 740222 GTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 740188 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| || ||| | ||||| | || |||||||| || ||||| ||||| || Sbjct 739658 TCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGAATTCCTTCCTTA 739599 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || |||||| | ||| ||||| | | ||||| || | || || Sbjct 739598 TCCTGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCGACTTCTAGGGTTATA 739539 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || ||||| || ||||||||||| Sbjct 739538 GTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 739504 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | || ||||| || || || || ||||| ||| Sbjct 740114 TCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATTCCTTCCTTG 740055 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | ||| ||||| | | || || || | || | | Sbjct 740054 TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAACTTCTAGGGTTACG 739995 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||||||||||||||| Sbjct 739994 GTCTTGCCTGTTAGGGTTTTCACAAAGATCTGCAT 739960 >seq10231 Length=688147 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 94779 CTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGC 94838 |||||||||| | | | |||| ||| | || || ||||| || | |||||| ||| Sbjct 310303 CTCCTCCTCTGAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCGG 310362 Query 94839 TCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || | ||||| |||||||||||| | ||||| | | ||||| || |||| Sbjct 310363 CGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAG 310422 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || ||||| ||||| | || || |||||||| | ||| ||||||| | || | Sbjct 310423 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCCA 310482 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 | || | || || || || || || || |||||||| |||||||||||| || Sbjct 310483 CCTCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCATGGTT 310535 >seq6147 Length=2276951 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| || | || | ||||| ||| | || || ||||| || | ||| || ||| Sbjct 1403066 CCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1403007 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||||| ||||| |||||| | ||||| | | ||||| || || ||| Sbjct 1403006 AGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGA 1402947 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || |||||||| | ||| ||||| | | ||||| Sbjct 1402946 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACC 1402887 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || | || ||||| || || || || |||||||| |||||||||||| || Sbjct 1402886 TCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATGGTT 1402836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448115800464360