Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq10231 96.9 3e-15 seq9707 95.1 1e-14 seq8682 89.7 5e-13 seq6563 82.4 7e-11 >seq10231 Length=688147 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| || || | || ||| | || | || || Sbjct 310531 ATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACTATAACCCTAGAGGTGGAGTCCTCT 310472 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || |||||||| || Sbjct 310471 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 310412 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | || ||| ||||| ||||| || | ||| | || |||||||||| Sbjct 310411 CAGCGCCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTCGCCGACTATAAC 310352 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 || || || || || || | || ||||| || || || ||||||||| Sbjct 310351 ATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCAGGCTCAGAGGAGGA 310304 >seq9707 Length=1014798 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || |||||| |||| || || | ||||| |||| | || Sbjct 739273 AATATGCAGATCTTCGTGAAAACACTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGC 739332 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | ||||| ||||| ||||| ||||| || || || || Sbjct 739333 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCGGAC 739392 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | || || | || ||| ||||| |||||||| | ||| | || ||||||| Sbjct 739393 CAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTCGCCGACTAT 739452 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| |||||||||| || Sbjct 739453 AACATCCAGAAGGAGTCCACTCTCCATCTGGTGCT 739487 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || | ||||| |||| | || Sbjct 725256 AATATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGC 725315 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | ||||| ||||| ||||| || || || || || || Sbjct 725316 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 725375 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | || || | || ||| ||||| |||||||| | ||| | || |||||| Sbjct 725376 CAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTCGCCGACTAC 725435 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| |||||||||| || Sbjct 725436 AACATCCAGAAGGAGTCCACTCTCCATCTGGTTCT 725470 >seq8682 Length=358022 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | ||||| || | |||||| |||| | ||| Sbjct 101537 ATGCAGATCTTTGTGAAAACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 101478 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | |||||| |||||| ||||| || || || || || || || Sbjct 101477 GACACCATCGATAATGTCAAAGCTAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAG 101418 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | || |||||| || ||||| || | ||| | | ||| || ||| Sbjct 101417 CAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTTGCCGATTACAAC 101358 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| || || || ||||| |||| || Sbjct 101357 ATTCAAAAGGAGTCCACCCTCCATTTGGTGCT 101326 >seq6563 Length=399665 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || | || || || | |||||| ||||| | || Sbjct 389451 AATGCAGATTTTCGTTAAGACCCTTACAGGGAAGACCATCACCCTCGAAGTGGAGAGCTC 389392 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | || || ||||||| ||||| || || || || || ||||| Sbjct 389391 GGACACAATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATTCCCCCAGATCA 389332 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || || |||| || ||| || ||||||||||||| ||| | | || || || || Sbjct 389331 GCAGAGGCTGATTTTCGCCGGGAAGCAACTCGAAGATGGTAGGACCCTCGCAGATTACAA 389272 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || ||||| || | || || || ||| | || || || |||| Sbjct 389271 CATCCAGAAGGAATCAACCCTTCACCTTGTGCTGCGTCTGAGGGGTGGAA 389222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478475117352720