Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4791 93.3 5e-14 seq10683 86.0 7e-12 seq3605 84.2 2e-11 seq6957 82.4 8e-11 seq6458 82.4 8e-11 seq4462 82.4 8e-11 seq3156 82.4 8e-11 >seq4791 Length=101701 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/108 (80%), Gaps = 6/108 (6%) Strand=Plus/Plus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GG 126318 ||||||||| ||||||||||||||||||||||||| | ||| |||||| |||| | Sbjct 92643 ACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAAAGA 92700 Query 126319 GAGCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 | |||||||||| || ||||| ||||||| || || | ||||||| Sbjct 92701 GGGCGTGGGTTCAAATCCCACTTCTGACAACTTTTTTCTCAAATTTTT 92748 >seq10683 Length=765774 Score = 86.0 bits (94), Expect = 7e-12 Identities = 75/92 (82%), Gaps = 6/92 (7%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GGG 126319 |||||||| ||||||||||||||||||||||||| | ||| |||||| |||| | | Sbjct 17942 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAAAGAG 17885 Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||||| || ||||| ||||||| || Sbjct 17884 GGCGTGGGTTCAAATCCCACTTCTGACAATTT 17853 >seq3605 Length=628412 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/102 (79%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 285202 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 285145 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||| || |||||| ||| || ||| || || | ||||| || Sbjct 285144 TTCAAATCCCACAGCTGTCACATTCTT-TTCAACTTTTTTTT 285104 >seq6957 Length=468292 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/97 (79%), Gaps = 6/97 (6%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GG 126318 || |||||| ||||||||||||||||||||||||| | ||| |||||| |||| | Sbjct 157316 ACTGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAAAGA 157259 Query 126319 GAGCGTGGGTTCGAACCCCACACCTGACAAATTATTA 126355 | |||||||||| || ||||| |||||| || ||| Sbjct 157258 GGGCGTGGGTTCAAATCCCACTTCTGACAGCTTTTTA 157222 >seq6458 Length=458596 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 194092 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 194149 Query 126325 GGGTTCGAACCCCACACCTGACAAATT 126351 |||||| || |||||| ||| ||| || Sbjct 194150 GGGTTCAAATCCCACAGCTGTCAATTT 194176 >seq4462 Length=375092 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| || || | ||| Sbjct 208630 GTCAGGGTGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCAAACGAGGGCG 208571 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 208570 TGGGTTCAAATCCCACTTCTGACA 208547 >seq3156 Length=811654 Score = 82.4 bits (90), Expect = 8e-11 Identities = 85/109 (78%), Gaps = 8/109 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 530048 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGGG 530105 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTTG 126370 ||||||||| || ||||| ||||| || ||| ||| ||| || ||| Sbjct 530106 CGTGGGTTCAAATCCCACTTCTGAC--ATCATTTTTGCCATTATTTTTG 530152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556642921251240