Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq8682 109 5e-19 seq9707 89.7 4e-13 seq6563 87.8 2e-12 >seq8682 Length=358022 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | |||||| || || | || || || || || |||||||| ||| Sbjct 100624 ATCCCACCACGTAGACGCAAAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 100683 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| |||||| || ||||| || || |||| | | ||| || || || Sbjct 100684 GCCAGGGTACGCCCATCTTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCTGGG 100743 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | |||| |||||| | | ||| Sbjct 100744 GGAATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTTTCA 100803 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| || || || || |||||||||||||| Sbjct 100804 ACCTCCAATGTGATGGTCTTGCCAGTGAGGGTCTTAACAAAAATCTGCAT 100853 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || ||||| | |||||||| || ||||||||||||||| Sbjct 101080 ATTCCACCACGGAGACGGAGCACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCG 101139 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| |||||||| ||||| |||||| |||| || | ||| ||||| || Sbjct 101140 GCAAGGGTTCGACCGTCTTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGG 101199 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || || || |||||| |||| | |||| |||||| | | || Sbjct 101200 GGGATGCCCTCCTTATCTTGAATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTCTCA 101259 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||||| || || || || || || || |||||||| Sbjct 101260 ACCTCAAGGGTAATGGTTTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | || || || |||||||||||||||||| Sbjct 101308 ATACCACCACGGAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCG 101367 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| |||| || | ||| |||||||| Sbjct 101368 GCAAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGT 101427 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| ||| | | || | |||||| | | ||| Sbjct 101428 GGGATACCCTCCTTGTCTTGAATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCC 101487 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || |||||||| ||||| |||||||| Sbjct 101488 ACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| || || || | || || || || ||||| Sbjct 100201 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCGTCCTCGAGCTGCTTACCG 100260 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || |||||||| || ||||| |||||| || Sbjct 100261 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 100320 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||||| |||| ||| | ||| || ||||| || || Sbjct 100321 ACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAAGGTGATCGTCTTCCCGGTAAGGGTC 100380 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 100381 TTCACAAAAATCTGCAT 100397 >seq9707 Length=1014798 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || ||||| |||||||| | ||| ||| ||| || | || || || Sbjct 740612 GTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTGCGACCATCCTCCAACTGCTTCCCT 740553 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||||||||| |||||||| |||||||| || ||||| |||||| || Sbjct 740552 GCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTC 740493 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | || || | | || || || | ||| | ||| |||||||| || || Sbjct 740492 ACGTTGTCGATCGTATCAGAGCTCTCAACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTC 740433 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 740432 TTGACGAAGATCTGCAT 740416 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || || || || || || ||| |||| |||||||| |||||||||||||| || || ||| Sbjct 740342 TCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTG 740283 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || | | || | ||||| | | ||||| || | ||| | | Sbjct 740282 TCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATC 740223 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||||||| || ||||| ||||| |||||||| Sbjct 740222 GTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 740188 >seq6563 Length=399665 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || || || | || || || |||||||||||||| || Sbjct 389677 ATTCCACCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCA 389736 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||| ||||| || || || || ||||||| | ||| ||||| || Sbjct 389737 GCAAGGGTCCTTCCATCCTCAAGCTGCTTCCCCGCAAAGATGAGCCTCTGCTGGTCTGGT 389796 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || || || |||||| |||| | |||| ||||| | | |||| Sbjct 389797 GGGATGCCCTCCTTATCCTGAATCTTGGCCTTTACATTGTCAATCGTGTCAGAGCTTTCG 389856 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || || || || || || || ||||||||||||||| Sbjct 389857 ACTTCCAGGGTGATGGTCTTTCCCGTAAGGGTCTTAACAAAAATCTGCATG 389907 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || || || | ||||| |||||||| |||||||| || Sbjct 390361 ATACCGCCACGGAGACGGAGGACCAAGTGGAGGGTAGACTCTTTTTGGATGTTGTAGTCA 390420 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| || ||||| || || |||||| |||| | | ||||| ||||| Sbjct 390421 GCAAGAGTACGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAACCTTTGTTGATCCGGG 390480 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| || || ||| | | |||| |||||| | | ||| Sbjct 390481 GGGATTCCCTCCTTGTCCTGGATTTTAGCTTTGACGTTGTCAATGGTGTCTGAGCTCTCG 390540 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||| || ||||| || || || ||||| Sbjct 390541 ACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCAT 390590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419974126735212