Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq9707 154 3e-32 seq10231 127 5e-24 seq6563 122 2e-22 seq8682 109 1e-18 seq6147 105 2e-17 >seq9707 Length=1014798 Score = 154 bits (170), Expect = 3e-32 Identities = 173/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| || ||||| | ||| || || ||||| |||||||||||| Sbjct 739502 CCGCCGCGAAGACGAAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCG 739443 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | |||||||| ||||||||||||||||| || ||| Sbjct 739442 AGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 739383 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| || |||||||| || || || ||||| || || | || |||| || Sbjct 739382 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC---TCG 739326 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || || || ||||| |||||||| Sbjct 739325 ACCTCGAGAGTGATGGTCTTGCCGGTTAGTGTTTTCACGAAGATCTGCAT 739276 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| || ||||| | ||||| || || |||||||| || |||||| Sbjct 739958 CCTCCGCGAAGACGAAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAATCGGCG 739899 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || ||||| ||||||||||| | || ||| || Sbjct 739898 AGGGTACGACCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCGGGAGGA 739839 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 |||||||| || || ||||| || || |||||||| || || | ||| ||| || Sbjct 739838 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAACTC---TCC 739782 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct 739781 ACCTCAAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 739732 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | ||| || ||||| | ||| || || ||||| || ||||||||| Sbjct 725485 CCGCCGCGGAGACGAAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCG 725426 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | |||||||| ||||||||||||||||| || || Sbjct 725425 AGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGA 725366 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || || |||||||| || || || ||||| || || | || |||| || Sbjct 725365 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC---TCG 725309 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || || || ||||| |||||||| Sbjct 725308 ACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 725259 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || ||||| | ||||| || || |||||||| ||||||||| Sbjct 740414 CCTCCACGAAGACGAAGCACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCG 740355 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| ||||||||||||||||| || || Sbjct 740354 AGGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 740295 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| || || || ||||| || || | || |||| || Sbjct 740294 ATCCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTC---TCG 740238 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| ||||| || || || || || |||||||| Sbjct 740237 ACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 740188 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || || || || ||||| | ||| || || |||||||| || ||||| Sbjct 739730 CCGCCGCGAAGCCTGAGCACCAGATGGAGCGTTGACTCCTTCTGGATATTGTAATCGGCT 739671 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || || || || || ||||||||||| | ||| ||| || Sbjct 739670 AGGGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGA 739611 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| ||||||||||| || ||||| ||||| || || | || |||| || Sbjct 739610 ATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAGCTC---TCG 739554 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || ||||| ||||| || || |||||||| |||||||| Sbjct 739553 ACTTCTAGGGTTATAGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 739504 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || ||||| | ||||| || || ||||||||||| |||||| Sbjct 740186 CCTCCACGAAGCCGAAGAACAAGATGGAGAGTGCTCTCCTTCTGGATATTATAATCGGCG 740127 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || | ||| || ||| Sbjct 740126 AGGGTGCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGG 740067 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || || |||||||| || || | ||| ||| ||| Sbjct 740066 ATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAACT 740007 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| || || || || || || || |||||||| Sbjct 740006 TCTAGGGTTACGGTCTTGCCTGTTAGGGTTTTCACAAAGATCTGCAT 739960 Score = 125 bits (138), Expect = 2e-23 Identities = 169/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | || || || || ||||| || || || Sbjct 740642 CCACCACGGAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCAGCA 740583 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || ||||| ||||| |||||||| || || ||| Sbjct 740582 AGAGTGCGACCATCCTCCAACTGCTTCCCTGCAAAGATGAGACGCTGCTGG---TCCGGG 740526 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| || ||||| |||||||| || || | ||| |||| Sbjct 740525 GGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATCGTATCAGAGCTC--- 740469 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 740468 TCAACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 740416 >seq10231 Length=688147 Score = 127 bits (140), Expect = 5e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| || || || || |||| ||| || || ||||| ||||||||||| Sbjct 310304 TCCTCCTCTGAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCGGC 310363 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || ||||| || | |||||||| ||||||||||| ||||| || || Sbjct 310364 GAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 310423 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| || |||||||| || || || || || || || | || || || || Sbjct 310424 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCCAC 310483 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || || || || ||||| |||||||| Sbjct 310484 CTCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCAT 310531 >seq6563 Length=399665 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || ||||| || || || || ||||| || | || ||||| |||||| Sbjct 390400 TCTTTTTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCAAGCTGCTTTCCAGCGAAG 390459 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | |||||| |||||||| || || ||||||||||| ||||| ||||| Sbjct 390460 ATCAACCTTTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTAGCTTTGACGTTG 390519 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| ||||| ||||| ||||| || || || Sbjct 390520 TCAATGGTGTCTGAGCTC---TCGACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTTTTC 390576 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 390577 ACGAAGATTTGCAT 390590 >seq8682 Length=358022 Score = 109 bits (120), Expect = 1e-18 Identities = 166/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || | ||||| || ||| || || || || || ||||| Sbjct 101082 TCCACCACGGAGACGGAGCACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGC 101141 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 || || || |||||||| | ||||| || ||||||||||| | ||| || ||| Sbjct 101142 AAGGGTTCGACCGTCTTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTG---GTCTGG 101198 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 ||||| || || ||||| || || || || || ||||| || || | || |||| Sbjct 101199 GGGGATGCCCTCCTTATCTTGAATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTC-- 101256 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || ||||| || || ||||||||||| |||||||| Sbjct 101257 -TCAACCTCAAGGGTAATGGTTTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||| | ||| || ||||| || || || ||||| Sbjct 101311 CCACCACGGAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCA 101370 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || ||||||||||| | ||| || |||| Sbjct 101371 AGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGG 101430 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || || || || ||||| || || || || | || ||| ||| Sbjct 101431 ATACCCTCCTTGTCTTGAATCTTAGCTTTGACATTATCGATGGTGTCAGAGCT---TTCC 101487 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || ||||| || || || |||||||| Sbjct 101488 ACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 91.5 bits (100), Expect = 3e-13 Identities = 162/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || || || | || || || ||||| || ||||| || Sbjct 100170 TCCACCACGGAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCCGC 100229 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||||| || | || || || || |||||||| | ||| || || || Sbjct 100230 CAGGGTCCTCCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGG---TCGGG 100286 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | || || || || |||||||| || || ||||| || || || | || |||| Sbjct 100287 GGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCAATGGTGTCCGAGCTC-- 100344 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||||||||||||||| || ||||| || || |||||||| Sbjct 100345 -TCGACCTCCAAGGTGATCGTCTTCCCGGTAAGGGTCTTCACAAAAATCTGCAT 100397 >seq6147 Length=2276951 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| || || ||||| || | || ||||| |||||| Sbjct 1403030 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 1402971 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || || || || || || |||||||| || || || || || Sbjct 1402970 ATGAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 1402911 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||||| || ||||| || || ||||| || || || || || ||| Sbjct 1402910 TCGATGGTGTCGGAGGATTCGACCTCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACG 1402851 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1402850 AAGATCTGCAT 1402840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179181306607078