Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq11707 100 6e-16 >seq11707 Length=330502 Score = 100 bits (110), Expect = 6e-16 Identities = 299/455 (66%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || ||||| ||||| || |||||| | ||||| || || || | || ||||| || Sbjct 116379 TCCTTTGCCGAGCGCATCATCGCCTTCGCTTGCGTCGAGGGGATCTTCTTCTCCGGAAGC 116438 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 ||||| ||||| || ||||| ||| || | ||||| || ||| | || ||| Sbjct 116439 TTCTGTGCCATTTTCTGGCTCAAGAAGCGGGGGTTAATGCCGGGACTCACCTTCTCCAAC 116498 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| | ||| || ||||||||||| ||| | |||| ||| | || || Sbjct 116499 GAGCTGATCTCGCGAGACGAGGGCCTGCACTGCGATTTCGCCTGCCTTCTCTACTCCCTC 116558 Query 243466 CTCCAGAACAAGCT-ACCATTCGAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAAA 243523 || ||| ||||| | | | | || ||||| ||| || | || || || | Sbjct 116559 CTGAGGAAGAAGCTGAGCGA--GGAGCGAGTCAAGGCTATCGTCCGCAACGCGGTGGAGA 116616 Query 243524 ACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAAC 243583 ||| | ||| || | |||||||| | || || | | | || |||||| | Sbjct 116617 TCGAGAGGGAGTTTGTGTGCGACGCGCTGCCGTGTGCGTTGGTCGGGATGAACGGCGCGT 116676 Query 243584 TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGA 243643 | ||| | ||||||||||| ||||| |||||||| | || |||||||| | | || Sbjct 116677 TGATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTCTTGGGTGCGCTTGGGTGCGGGA 116736 Query 243644 AAGTGTAC-AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 | |||||| | ||| ||||| |||| | |||||||| || ||| | || ||||| Sbjct 116737 AGGTGTACGGTGTTCAA-AACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAG 116795 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||||||||||| ||| | || |||| || || Sbjct 116796 ACCAACTTCTTCGAGAAGAGGGTGGGTGAGTACCA 116830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102437696524350