Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11707 145 9e-30 >seq11707 Length=330502 Score = 145 bits (160), Expect = 9e-30 Identities = 378/566 (67%), Gaps = 13/566 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || |||| ||||||||||||||| |||||||| | ||| ||| |||||| Sbjct 116828 GTACTCACCCACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCAT 116769 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTG-TTGGCAC-CCCAATCTGTTTGAGGAGA 125875 ||||||| ||||| |||| || | || | | ||||| | | ||| Sbjct 116768 CCAATCAAACGGGTT--TTGAACACCGTACACCTTCCCGCACCCAAGCGCACCCAAGAGC 116711 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | |||| |||| ||||||| |||| | | |||||| |||| | | Sbjct 116710 CGGTCGGCGACGAACTCGATGTACTGGCTCATCAACGCGCCGTTCATCCCGACCAACGCA 116651 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || |||||||| | | ||| || |||| || ||||| || | || ||||| || Sbjct 116650 CACGGCAGCGCGTCGCACACAAACTCCCTCTCGATCTCCACCGCGTTGCGGACGATAGCC 116591 Query 125996 T-GAATGGTGTCCACCC-CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 126053 | || | | ||| | | ||| | | || | || | |||| ||| || | Sbjct 116590 TTGACTCGC-TCCTCGCTCAGCT-TCTTCCTCAGGAGGGAGTAGAGAAGGCAGGCGAAAT 116533 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 | ||| || |||||||| || ||||| || || || |||||| ||||| ||||| | Sbjct 116532 CGCAGTGCAGGCCCTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATTA 116473 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 ||||||||||| | ||||||||| ||||| || || ||||||||||| ||||| | Sbjct 116472 ACCCCCGCTTCTTGAGCCAGAAAATGGCACAGAAGCTTCCGGAGAAGAAGATCCCCTCGA 116413 Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGA-GCGCGACTTTGTGTCAAACCACTTC 126232 | || ||||| || | || ||||| |||||||| || || || | ||| Sbjct 116412 CGCAAGCGAAGGCGATGATGCGCTCGGCAAAGGACTCGGAAC----CATCGATCCAGCGG 116357 Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCC 126292 | |||||||| ||||| || | || || |||||||| | ||| || | ||||| Sbjct 116356 AGGGCCCACTGGGCCTTCTTGGCAATGCAAGGGACGGTGTCGATTGCGTGGAAGAGGCGG 116297 Query 126293 TTCTTTTCTGATGGATCTTTGATGTA 126318 |||| || | | ||| |||||||| Sbjct 116296 GTCTTCTCAGCGGAATCCTTGATGTA 116271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597119877937080