Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq8682 100 2e-16 seq9707 82.4 5e-11 >seq8682 Length=358022 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||||||||| || || || |||||||||||| || ||| ||||||| Sbjct 101101 ACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCGACCGTCTTCA 101160 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||||||||| | |||| | ||| ||||| || || || ||||| || | Sbjct 101161 AGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCTTGA 101220 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||||| | || || || || | || || || | |||||||||||| Sbjct 101221 ATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTCTCAACCTCAAGGGTAATGGTTTTC 101280 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || || || |||||| Sbjct 101281 CCAGTGAGGGTCTTGACGAAGATCTGCATA 101310 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| ||||| || || ||||| |||||||||||| || ||| |||| || Sbjct 101329 ACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCAAGGGTTCGGCCGTCCTCG 101388 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | |||| | ||| ||||| ||| || || |||||||| | Sbjct 101389 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCTTGA 101448 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || || || || |||| || || | ||| ||||| || Sbjct 101449 ATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTG 101508 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| ||||| || ||||| Sbjct 101509 CCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || || ||||| || || || || || |||||||| || Sbjct 100399 CCACCACGCAGACGCAGCACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGCA 100458 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || |||| || | || || || || | ||||| | ||| ||||| ||| Sbjct 100459 AGGGTCCTGCCGTCCTCGAGCTGCTTACCCGCAAAGATCAACCTCTGCTGGTCCGGGGGA 100518 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||||||| || ||| | || || || || ||||||| Sbjct 100519 ATGCCCTCCTTGTCCTGAATTTTGGCCTTAACATTGTCGATTGTGTCCGAGCTTTCTACC 100578 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| || || || || || || |||||||||||||| Sbjct 100579 TCCAAGGTAATGGTCTTGCCAGTGAGTGTCTTCACAAAAATTTGCAT 100625 >seq9707 Length=1014798 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || || || ||||| || ||| ||| ||| ||||||| | || Sbjct 739479 ATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCCGTCTTCGAGCTG 739420 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| || ||| | |||| |||||| ||||| || |||||||||||||| || || Sbjct 739419 TTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTT 739360 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || | || || || ||| | || || || | || ||||| || || || Sbjct 739359 GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGT 739300 Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180 || ||||| || || || ||||||||| Sbjct 739299 TAGTGTTTTCACGAAGATCTGCATATTT 739272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357255661764785