Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq9707 134 1e-26 seq6563 95.1 1e-14 seq6147 95.1 1e-14 seq3222 93.3 4e-14 seq8682 89.7 5e-13 >seq9707 Length=1014798 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| ||||| | ||| ||||| |||||||| ||||| |||||||| |||||| Sbjct 739733 ATACCGCCGCGAAGCCTGAGCACCAGATGGAGCGTTGACTCCTTCTGGATATTGTAATCG 739674 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| || ||||| || || || ||| | |||| | ||||| |||||| Sbjct 739673 GCTAGGGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGC 739614 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| ||||| || || || ||||| || | || | |||||||| ||| Sbjct 739613 GGAATTCCTTCCTTATCCTGGATCTTGGCTTTGA-CGTTGTCGATCGTGTCGGAGCTCTC 739555 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || | || |||||||| || ||||| || || || ||||| Sbjct 739554 GACTTCTAGGGTTATAGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 739504 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | ||| ||||| || || || ||||| ||||| ||||| ||| Sbjct 739505 ATACCGCCGCGAAGACGAAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCG 739446 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| || || | |||||||| ||| | |||| || |||||||||||| Sbjct 739445 GCGAGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGC 739386 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || || || || || |||| || | || | ||||||||| ||| Sbjct 739385 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTC 739327 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| |||||||| | || ||||||||||| ||||| || || || ||||| Sbjct 739326 GACCTCGAGAGTGATGGTCTTGCCGGTTAGTGTTTTCACGAAGATCTGCAT 739276 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || ||||| || || || ||||| ||||| || || ||| | Sbjct 725485 CCGCCGCGGAGACGAAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCG 725426 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| || || | |||||||| ||| | |||| || ||||||||||||||| Sbjct 725425 AGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGA 725366 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || || || || || || |||| || | || | ||||||||| |||||| Sbjct 725365 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTCTCGAC 725307 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| | || ||||||||||| ||||| || || || ||||| Sbjct 725306 CTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 725259 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || |||| | || ||||| || || ||||| ||||||||||||||| Sbjct 740189 ATCCCTCCACGAAGCCGAAGAACAAGATGGAGAGTGCTCTCCTTCTGGATATTATAATCG 740130 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | || || | || || || ||| | || | | |||||||||||| Sbjct 740129 GCGAGGGTGCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGC 740070 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || || || || || || | || | || | ||||||||| || Sbjct 740069 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTTTC 740011 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || || ||||| ||||| ||||| ||||| || ||||| Sbjct 740010 AACTTCTAGGGTTACGGTCTTGCCTGTTAGGGTTTTCACAAAGATCTGCAT 739960 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | ||| ||||| || || ||||| |||||||| || ||| Sbjct 740417 ATCCCTCCACGAAGACGAAGCACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCG 740358 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || || | || ||||| ||| | |||| || ||||||||||| Sbjct 740357 GCGAGGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGA 740298 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || || || | | || | | | || | || | ||||| || ||| Sbjct 740297 GGAATCCCCTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTCTC 740239 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| || | ||| |||||||| || ||||| ||||| || |||||| Sbjct 740238 GACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCATC 740187 >seq6563 Length=399665 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | || ||| || || || ||||||||||| ||||| || ||||| Sbjct 389221 ATTCCACCCCTCAGACGCAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCT 389280 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| || ||| || | ||| || || ||| | |||| | ||||| || || Sbjct 389281 GCGAGGGTCCTACCATCTTCGAGTTGCTTCCCGGCGAAAATCAGCCTCTGCTGATCTGGG 389340 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| || || |||||||| ||| || | || | ||||| || ||| Sbjct 389341 GGAATGCCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATTGTGTCCGAGCTCTCC 389400 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || || || || || || || || ||||| ||||| Sbjct 389401 ACTTCGAGGGTGATGGTCTTCCCTGTAAGGGTCTTAACGAAAATCTGCAT 389450 >seq6147 Length=2276951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | ||| | | ||| || || || || || ||||| ||||| || || ||| | Sbjct 1403066 CCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1403007 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || ||||| ||| | || | || ||||||||||||||| Sbjct 1403006 AGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGA 1402947 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||| || || || || || || |||| || | ||||||||| || ||||| Sbjct 1402946 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACC 1402887 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | || || || ||||| ||||| || || || ||||| Sbjct 1402886 TCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 1402840 >seq3222 Length=516221 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 |||| || || |||||||| || ||||| || ||||| ||||||||||| || ||||| Sbjct 55191 TTCCACCCCGAAGCCTCAAAACCAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCAG 55250 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | || | ||| |||||||| || || || | ||||||| ||||| || |||| Sbjct 55251 CAAGAGTCCTCCCATCTTCCAATTGCTTCCCAGCAAAAATCAATCTCTGCTGATCAGGCG 55310 Query 45232 GAATGCCTTCTTTATCTTGAA 45252 | || ||||| ||||| |||| Sbjct 55311 GGATTCCTTCCTTATCCTGAA 55331 >seq8682 Length=358022 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || ||||| | | ||| | ||| || || |||||||| || || || |||||| Sbjct 101080 ATTCCACCACGGAGACGGAGCACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCG 101139 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| | || || | ||||| || ||| | |||| | |||||||| || Sbjct 101140 GCAAGGGTTCGACCGTCTTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGG 101199 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || ||||||||||| || || | || | || | |||||| || ||| Sbjct 101200 GGGATGCCCTCCTTATCTTGAATCTTGGCCTTTA-CGTTATCAATGGTGTCAGAGCTCTC 101258 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||||| || || || || || || || || ||||| Sbjct 101259 AACCTCAAGGGTAATGGTTTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||| || || || |||||||| || || |||||| Sbjct 101308 ATACCACCACGGAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCG 101367 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| || || | || || || ||| | |||| | ||||||||||| Sbjct 101368 GCAAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGT 101427 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || || |||||||| || ||||| || | |||||| || || Sbjct 101428 GGGATACCCTCCTTGTCTTGAATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCC 101487 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || | || ||||| || |||||||| ||||| || |||||| Sbjct 101488 ACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAGATCTGCATC 101538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451826348097960