Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq11707 152 8e-32 >seq11707 Length=330502 Score = 152 bits (168), Expect = 8e-32 Identities = 540/837 (65%), Gaps = 19/837 (2%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| ||||||||||| |||| || || || ||||| | | || |||| Sbjct 116814 TCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATCCAATCAAACGGGT 116755 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 | | || || |||| | || || || ||| | || ||| || || || | Sbjct 116754 TTTGAACACCGTACACCTTCCCGCACCCAAGCGCACCCAAGAGCCGGTCGGCGACGAACT 116695 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 ||||||| | |||| | | | ||| ||||| | || | | || ||||| || Sbjct 116694 CGATGTACTGGCTCATCAACGCGCCGTTCATCCCGACCAACGCACACGGCAGCGCGTCGC 116635 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 ||| ||||||| |||| ||||| ||||| | | || || | ||| || || | | Sbjct 116634 ACACAAACTCCCTCTCGATCTCCACCGCGTTGCGGACGATAGCCTTGACTCGCTCCTCGC 116575 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 | |||| | | | || | | || ||||| || || ||||||||||| |||| Sbjct 116574 TCAGCTTCTTCCTCAGGAGGGAGT---AGAGAAGGCAGGCGAAATCGCAGTGCAGGCCCT 116518 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 |||| || ||||| | ||||||||| | | |||| |||||||| | ||| ||| |||| Sbjct 116517 CGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATTAACCCCCGCTTCTTGA 116458 Query 160008 GCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 |||| ||||||| | || |||| ||| || ||||||||||| ||| || || || Sbjct 116457 GCCAGAAAATGG-CACAGAAGCTTCCGGAGAAGAAGATCCCCTCGACGCAAGCGAAGGCG 116399 Query 160067 ACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCC 160126 | || | ||| ||| ||| | || ||| | |||| | |||||| | ||| Sbjct 116398 ATGATGCGCTCGGCAA---AGGACTCGGAACCATCGATCCAGCGGAGGGCCCACTGGGCC 116342 Query 160127 TTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACA 160186 ||||| || ||||| || | | |||| |||| || | | | || ||| | Sbjct 116341 TTCTTGGCAATGCAAGGGACGGTGTCGATTGCGTGGAAGAGGCGGGTCTTCTCAGCGGAA 116282 Query 160187 TCCTTGA--TCAGAGT--AGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242 ||||||| | ||| | || | ||| |||||| || | ||| | || ||||| Sbjct 116281 TCCTTGATGTAAGACTCCAGAAGGAGGCT----GTACATCTCGGAGTGGATGTTCTCGAT 116226 Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302 ||| ||||| ||| ||||| |||||| ||| ||||| | ||||||| Sbjct 116225 GGCGATCTGGAAGCCATAGAAGGCGCGGGCCTCCGCGACCTGGACCTCTTTCATGAACCT 116166 Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362 | | ||||| | || | ||||||| ||| |||||||| || | ||||| | Sbjct 116165 TCCTGCGAGATTCTCTAGGACGATGCCGTCGGAGGCGGCAAAGAAGGCGAGGACGTGGGT 116106 Query 160363 GATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAA 160422 |||||| || ||||||| | | || ||| | || ||||| |||| | Sbjct 116105 GATGAAGTGCTTCTCGTCGGGGGTTAG---GGCTTCGAATTGGAGGACGTCCTGGGAGAG 116049 Query 160423 ATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 ||| ||||| || ||| |||| || || | || | |||||||| ||||||| Sbjct 116048 ATCGACCTCCTCGGCGGTCCAGAAGGAGGCTTCCGCCTTCTTGTACATCTCCCAGAT 115992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794844085588560