Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9707 154 2e-32 seq6147 141 1e-28 seq10231 116 4e-21 seq8682 116 4e-21 seq6563 98.7 1e-15 >seq9707 Length=1014798 Score = 154 bits (170), Expect = 2e-32 Identities = 175/231 (76%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | ||||||||| | || |||||||| |||||||||||||||| Sbjct 740414 CCTCCACGAAGACGAAGCACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCG 740355 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || |||||| |||| ||||||||||| |||||||| |||| ||||||||||| | || Sbjct 740354 AGGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 740295 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | |||||||||| |||||| ||| | ||| | | | |||||| |||| || Sbjct 740294 ATCCCCTCCTTGTCCTGGATCTTGGCCTT-AACGTTGTCGATCGTGTCCGAGCTC---TC 740239 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||| || ||||| || || ||||| |||||||| ||||| Sbjct 740238 GACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 740188 Score = 127 bits (140), Expect = 2e-24 Identities = 160/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||| | || |||||| ||||| |||||||||| || || || |||| ||| Sbjct 725467 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCGTCTTCG 725408 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || |||||||| |||| ||||||||||| | ||| | | |||||||||| | Sbjct 725407 AGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGG 725348 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| ||||| ||| | | | ||||| |||| || || || | |||||||| Sbjct 725347 ATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAGTGATGGT 725292 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||||| || || ||||| || ||||| ||||| || Sbjct 725291 CTTGCCGGTTAGGGTTTTCACGAAGATCTGCATATT 725256 Score = 122 bits (134), Expect = 1e-22 Identities = 163/223 (73%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||||||| | || |||||| ||||| || ||||||| || || || | Sbjct 739491 ACGAAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCC 739432 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| |||||||| || |||||||| |||| ||||||||||| | ||| | | ||||| Sbjct 739431 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATTCCTTCCTT 739372 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| |||||| ||||| ||| | | | ||||| |||| || || || | | Sbjct 739371 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TCGACCTCGAGAG 739316 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||||||| ||||| || || ||||| || ||||| ||||| || Sbjct 739315 TGATGGTCTTGCCGGTTAGTGTTTTCACGAAGATCTGCATATT 739273 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | || |||||||| |||||||| || |||| || ||||| |||| ||| Sbjct 740168 ACAAGATGGAGAGTGCTCTCCTTCTGGATATTATAATCGGCGAGGGTGCGACCGTCCTCG 740109 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| || | | ||||||||| | ||| | | ||||||||| | Sbjct 740108 AGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGG 740049 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||| | ||| | | | |||||| ||| || || | || | ||| || Sbjct 740048 ATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTTTCAACTTCTAGGGTTACGGTCTT 739990 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || ||||| |||||||| ||||| Sbjct 739989 GCCTGTTAGGGTTTTCACAAAGATCTGCAT 739960 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | |||||||| | || |||||||| ||||||||||| |||| Sbjct 739958 CCTCCGCGAAGACGAAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAATCGGCG 739899 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| || |||||||| |||||||| |||| | ||||| |||| || Sbjct 739898 AGGGTACGACCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCGGGAGGA 739839 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG---CTCGATTC 46542 | | |||||||| |||||| ||| | ||| | | | |||||| ||| || Sbjct 739838 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAACTC---TC 739783 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || | |||||| || ||||| || || || || || ||||| ||||| Sbjct 739782 CACCTCAAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 739732 Score = 105 bits (116), Expect = 8e-18 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || |||||| ||||||||||| |||| ||| || || |||| || Sbjct 739713 CACCAGATGGAGCGTTGACTCCTTCTGGATATTGTAATCGGCTAGGGTTCGGCCGTCCTC 739654 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | ||||||||||||||| |||| | |||||| || | ||| | | ||||| ||| Sbjct 739653 CAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGAATTCCTTCCTTATCCTG 739594 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGG 46559 |||||| |||| ||| | | | |||||| |||| || || || | || || | Sbjct 739593 GATCTTGGCTTTGA-CGTTGTCGATCGTGTCGGAGCTC---TCGACTTCTAGGGTTATAG 739538 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || || ||||| || ||||| ||||| Sbjct 739537 TCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 739504 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || |||||||| || | |||||||| | || || | |||||| || || || Sbjct 740607 CTCCTTCTGAATATTGTAATCAGCAAGAGTGCGACCATCCTCCAACTGCTTCCCTGCAAA 740548 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||| | ||| Sbjct 740547 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCA-CGT 740489 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||| || |||| || || || | ||||| || ||||| || || || | Sbjct 740488 TGTCGATCGTATCAGAGCTC---TCAACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCT 740432 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||| ||||| Sbjct 740431 TGACGAAGATCTGCAT 740416 >seq6147 Length=2276951 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 |||||| || | || | |||||| || | || |||||| ||||| |||||||||| Sbjct 1403067 GCCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1403008 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || || || |||| ||||||||||| |||||||| || | |||||||||||| | ||| Sbjct 1403007 GAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 1402948 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || |||||||||| |||||| ||||| | | | |||||| ||||| || Sbjct 1402947 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGAC 1402888 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || ||||| || ||||| || ||||| || ||||| ||||| Sbjct 1402887 CTCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 1402840 >seq10231 Length=688147 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||||| || || || |||| |||||||| || |||||||| Sbjct 310340 CTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 310399 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||||| || | | ||||||||| |||||| ||||| | Sbjct 310400 GATCAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 310459 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | || || || |||||||| || ||||| || Sbjct 310460 GTCGATGGTGTCAGAGGACTCCACCTCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCAC 310519 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 310520 GAAGATCTGCAT 310531 >seq8682 Length=358022 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| |||| || | || |||||| ||||| |||||||||| || || || | Sbjct 100866 ACGCAAAACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGTCC 100925 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||| |||||||| || ||||| | ||||||||| | || | | |||||| Sbjct 100926 ATCCTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTT 100985 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||| || | | | | |||||| ||| || |||| ||||| Sbjct 100986 GTCCTGAATCTTGGCTTTCACATTATCAATGGTGTCGGAACTTTCAACCTCCAAGGTGAT 101045 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||||| || || || || |||||||||||||||||| Sbjct 101046 GGTTTTTCCGGTGAGGGTCTTAACAAAGATTTGCATT 101082 Score = 111 bits (122), Expect = 2e-19 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| ||| | || ||||||||| || ||||| |||| || || || |||| || Sbjct 101328 CACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCAAGGGTTCGGCCGTCCTC 101387 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| | ||||||||| | || | | ||||||||| Sbjct 101388 GAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCTTG 101447 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| |||| | | | ||||| ||| |||||| || | |||||||| Sbjct 101448 AATCTTAGCTTTGACATTATCGATGGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGT 101504 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || ||||| |||||||| ||||| Sbjct 101505 CTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | |||| ||||||||||| ||||| || Sbjct 100206 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCGTCCTCGAGCTGCTTACCGGCAAA 100265 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| | ||||||||||| || | || |||||||||| |||||| ||| | | Sbjct 100266 GATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATT 100325 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || |||| ||||| || || || || || || || Sbjct 100326 GTCAATGGTGTCCGAGCTC---TCGACCTCCAAGGTGATCGTCTTCCCGGTAAGGGTCTT 100382 Query 46579 AACAAAGATTTGCAT 46593 ||||| || ||||| Sbjct 100383 CACAAAAATCTGCAT 100397 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| || | ||| |||||| ||||| |||||||| | || || | | Sbjct 100410 ACGCAGCACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTCCTGCC 100469 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| || || || ||||| | ||||||||| | || | || |||||| Sbjct 100470 GTCCTCGAGCTGCTTACCCGCAAAGATCAACCTCTGCTGGTCCGGGGGAATGCCCTCCTT 100529 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| || || ||| | | | | ||||| ||| ||| || |||| || Sbjct 100530 GTCCTGAATTTTGGCCTTAACATTGTCGATTGTGTCCGAGCT---TTCTACCTCCAAGGT 100586 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| ||||| || || || || ||||| |||||||| Sbjct 100587 AATGGTCTTGCCAGTGAGTGTCTTCACAAAAATTTGCAT 100625 >seq6563 Length=399665 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||||| |||||||| |||| || |||||||| || || || Sbjct 390172 TCCTTTTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCCAGCTGCTTTCCCGCAAAG 390231 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | || | || ||||||||| |||||| ||||| | Sbjct 390232 ATCAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTG 390291 Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | ||||| ||| ||| || || | || ||||| || || || || || || Sbjct 390292 TCAATTGTGTCAGAGCT---TTCAACCTCAAGGGTTATGGTCTTTCCGGTGAGGGTCTTT 390348 Query 46580 ACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 390349 ACGAAGATCTGCAT 390362 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| |||||||| |||||||| | ||||| || |||| || |||||||| || ||||| Sbjct 390399 CTCTTTTTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCAAGCTGCTTTCCAGCGAA 390458 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | || || || | || | | |||||||||| ||| || |||| ||| Sbjct 390459 GATCAACCTTTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTAGCTTTGA-CGT 390517 Query 46522 CGCCACCG-TGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | || | |||| |||| || || || | |||||||| || || || || |||| Sbjct 390518 TGTCAATGGTGTCTGAGCTC---TCGACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTTT 390574 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||||||||| Sbjct 390575 TCACGAAGATTTGCAT 390590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565017243410520