Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6563 111 6e-19 seq8682 98.7 4e-15 seq9617 95.1 5e-14 seq10231 91.5 6e-13 seq4564 91.5 6e-13 seq3222 91.5 6e-13 seq984 91.5 6e-13 seq4230 87.8 7e-12 seq11614 84.2 9e-11 >seq6563 Length=399665 Score = 111 bits (122), Expect = 6e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| ||||| ||||| || ||||| || ||||| || ||| || Sbjct 390134 ATGCAAATCTTCGTTAAGACACTCACTGGAAAGACTATAACCCTTGAGGTCGAAAGTTCC 390075 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || || || ||||| |||||||| || || || || || Sbjct 390074 GATACGATTGACAATGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 390015 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | |||||| | || || || ||||| || ||||| ||| | ||||||||||| Sbjct 390014 CAGAGGCTCATTTTCGCTGGAAAGCAGCTTGAGGACGGAAGGACTCTTGCGGATTATAAC 389955 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| |||| || ||||| || Sbjct 389954 ATCCAGAAGGAGTCAACCCTCCACTTGGT 389926 Score = 100 bits (110), Expect = 1e-15 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || || || || || || || || || || || || || Sbjct 389451 AATGCAGATTTTCGTTAAGACCCTTACAGGGAAGACCATCACCCTCGAAGTGGAGAGCTC 389392 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | || ||| |||||||| ||||| || ||||| || ||||| Sbjct 389391 GGACACAATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATTCCCCCAGATCA 389332 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | | |||||| | ||||| ||||| |||||||| || || | || ||||| || Sbjct 389331 GCAGAGGCTGATTTTCGCCGGGAAGCAACTCGAAGATGGTAGGACCCTCGCAGATTACAA 389272 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 || | ||||| |||| |||||| Sbjct 389271 CATCCAGAAGGAATCAACCCTTCAC 389247 >seq8682 Length=358022 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| ||||| ||||| ||||| ||||| ||| Sbjct 101309 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAAACCATTACCCTTGAGGTTGAGAGCTCT 101250 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || |||||||||||||| || || || || || || Sbjct 101249 GACACCATTGATAACGTAAAGGCCAAGATTCAAGATAAGGAGGGCATCCCCCCAGACCAG 101190 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || ||||| |||||||| || |||| | || ||||| || Sbjct 101189 CAGAGGCTGATCTTCGCTGGCAAACAGCTTGAAGACGGTCGAACCCTTGCCGATTACAAC 101130 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || ||||| || || Sbjct 101129 ATTCAGAAGGAATCTACCCTTCATTTGGT 101101 >seq9617 Length=254709 Score = 95.1 bits (104), Expect = 5e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| |||||||||||||| |||| ||| ||||| ||||||||| |||| || | || Sbjct 105829 ATTGGTATTGATCTTGGAACAACCTATTCTTGTGTTGGTGTTTACAAAAACGGTCACGTT 105770 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGT 451023 ||||| ||||| || ||||||||| || | ||| || || ||||| Sbjct 105769 GAAATCATAGCCAACGACCAAGGAAACCGTATTACCCCATCGTGGGT 105723 >seq10231 Length=688147 Score = 91.5 bits (100), Expect = 6e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || || ||||| || || || || || || ||| Sbjct 310531 ATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACTATAACCCTAGAGGTGGAGTCCTCT 310472 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || || ||||||||||| ||||| || || Sbjct 310471 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 310412 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || ||| | || ||||| || || || || |||| | || || ||||| Sbjct 310411 CAGCGCCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTCGCCGACTATAAC 310352 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || |||||| | || | || || |||||| Sbjct 310351 ATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCAGGCTCAGAGGA 310307 >seq4564 Length=79912 Score = 91.5 bits (100), Expect = 6e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||| ||| | || || | || || ||||| || |||||||| | ||| | ||| || Sbjct 3156 AGTGACTAAAGCTGTTGTCACCGTGCCCGCATACTTCAATGACTCTCAAAGAACAGCTAC 3097 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 |||||||| || | ||||||||||||| | |||||||| ||||| |||||||| || || Sbjct 3096 AAAAGATGCTGGTCGTATTGCTGGTTTAGAGGTTCTTCGTATTATAAATGAACCCACTGC 3037 Query 451432 AGCTGCTCTAGCATATGG 451449 ||| | | || ||||| Sbjct 3036 TGCTTCATTGGCCTATGG 3019 >seq3222 Length=516221 Score = 91.5 bits (100), Expect = 6e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 391138 TTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAAC 391197 |||| |||||||||||||| || |||||||| || | || ||||| | ||||| ||| Sbjct 55331 TTCAGGATAAGGAAGGAATCCCGCCTGATCAGCAGAGATTGATTTTTGCTGGGAAGCAAT 55272 Query 391198 TTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCA 391252 | |||||||| || ||| | || ||||| || || | ||||| |||||||||| Sbjct 55271 TGGAAGATGGGAGGACTCTTGCTGATTACAACATCCAAAAGGAGTCAACACTTCA 55217 >seq984 Length=45078 Score = 91.5 bits (100), Expect = 6e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||| ||| | || || | || || ||||| || |||||||| | ||| | ||| || Sbjct 42468 AGTGACTAAAGCTGTTGTCACCGTGCCCGCATACTTCAATGACTCTCAAAGAACAGCTAC 42409 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 |||||||| || | ||||||||||||| | |||||||| ||||| |||||||| || || Sbjct 42408 AAAAGATGCTGGTCGTATTGCTGGTTTAGAGGTTCTTCGTATTATAAATGAACCCACTGC 42349 Query 451432 AGCTGCTCTAGCATATGG 451449 ||| | | || ||||| Sbjct 42348 TGCTTCATTGGCCTATGG 42331 >seq4230 Length=1343068 Score = 87.8 bits (96), Expect = 7e-12 Identities = 109/149 (73%), Gaps = 8/149 (5%) Strand=Plus/Minus Query 451893 TTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGT 451952 ||||||| |||| ||||| || || || || ||||||||||| | ||| | | ||| Sbjct 157028 TTGATGATGTTGTCCTTGTCGGTGGCTCCACCAGAATTCCTAAAGTGCAACAACTATTGC 156969 Query 451953 ----CTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTT 452008 |||||| | ||||| | || || |||||| | || || ||||| || ||| Sbjct 156968 AGGACTTCTTCAAT----GGAAAGGAGCTTTGCAAGAGCATTAACCCAGATGAGGCCGTT 156913 Query 452009 GCATATGGTGCTGCAGTTCAAGCAGCTAT 452037 || |||||||||||||||||||| ||||| Sbjct 156912 GCTTATGGTGCTGCAGTTCAAGCTGCTAT 156884 >seq11614 Length=450890 Score = 84.2 bits (92), Expect = 9e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || ||||||||||| ||||||||||||||||| ||| | |||||||| |||||||| Sbjct 410562 GCTGTTATTACTGTTCCTGCTTATTTCAATGATGCCCAAAGACAAGCAACCAAAGATGCT 410621 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || ||||| || | |||| | | ||||| || || || || || ||||| || Sbjct 410622 GGCAGAATTGCAGGCCTTGATGTGCAGAGGATTATCAACGAGCCAACTGCTGCTGCACT 410680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974926049866508