Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq10231 114 8e-21 seq8682 114 8e-21 seq9707 102 5e-17 seq6147 100 2e-16 seq6563 89.7 3e-13 >seq10231 Length=688147 Score = 114 bits (126), Expect = 8e-21 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 |||||| || | ||| | ||||| ||||| || || ||||| ||||||||||| | Sbjct 310304 TCCTCCTCTGAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCGGC 310363 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| |||| | || || |||||||||||||| || || || || |||||||| | || Sbjct 310364 GAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 310423 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCT 34929 | || |||||||| ||||| ||||| || | ||||| ||| || || Sbjct 310424 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCAGAGGACT 310479 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || | |||||| || || ||||| || || ||||| ||||||||||| Sbjct 310480 CCACCTCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCAT 310531 >seq8682 Length=358022 Score = 114 bits (126), Expect = 8e-21 Identities = 158/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||||||||| | || || ||||| ||||| ||||| | ||| | ||| |||| Sbjct 100869 CAAAACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGTCCATC 100928 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || |||||||| |||||||| || | | ||||||||| | || | ||||||||||| Sbjct 100929 CTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTC 100988 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCGGCC--TCAACATCGACGGTTA 34944 |||||| ||| || || |||| || | | | | ||||| || | ||| | Sbjct 100989 CTGAATCTTGGCTTTCAC--AT--TATCAATGGTGTCGGAACTTTCAACCTCCAAGGTGA 101044 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||||| ||||| ||||| |||||||| ||||| Sbjct 101045 TGGTTTTTCCGGTGAGGGTCTTAACAAAGATTTGCAT 101081 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || ||| ||||||||||| || || | |||| |||| | || || Sbjct 101101 ACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCGACCGTCTTCA 101160 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || || || || | ||||||||| | || | |||||||| || | Sbjct 101161 AGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCTTGA 101220 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| | |||||| || | ||| |||||||| Sbjct 101221 ATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTCTCAACCTCAAGGGTAATGGTTTTC 101280 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || |||||||||||| Sbjct 101281 CCAGTGAGGGTCTTGACGAAGATCTGCATA 101310 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||| || || |||||||| || || | |||| |||| | || || Sbjct 101329 ACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCAAGGGTTCGGCCGTCCTCG 101388 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || | |||||||| | || | ||||||||||| | Sbjct 101389 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCTTGA 101448 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| || ||||||| ||| | || || |||| ||| ||||| Sbjct 101449 ATCTTAGCTTTGAC--AT--TATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGT 101504 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || |||||||| ||||||||||||||||| Sbjct 101505 CTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||||||||||| || || ||||| ||||| ||||| | ||| | || |||| Sbjct 100641 CAAAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGCCCATC 100700 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || |||||||| |||||||| || | | ||||| ||| | || | ||||||||||| Sbjct 100701 TTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCCTCCTTGTC 100760 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | || | || | ||||| || | || ||||| Sbjct 100761 TTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTTTCAACCTCCAATGTGATGGT 100820 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| ||||| ||||| |||||||| Sbjct 100821 CTTGCCAGTGAGGGTCTTAACAAAAATCTGCAT 100853 >seq9707 Length=1014798 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| |||| | || || |||||||||||||| || Sbjct 725449 TCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAG 725390 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| |||||| Sbjct 725389 ATCAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 725330 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| || ||||| || || || || || ||||| Sbjct 725329 TCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACG 725270 Query 34971 AAGATCTGCATATT 34984 |||||||||||||| Sbjct 725269 AAGATCTGCATATT 725256 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||| | ||| |||| | || || |||||||||||||| || Sbjct 739466 TCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAG 739407 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | || |||||||| ||||| |||||| Sbjct 739406 ATCAGACGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 739347 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| || ||||| || || || || || ||||| Sbjct 739346 TCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGTGTTTTCACG 739287 Query 34971 AAGATCTGCATATT 34984 |||||||||||||| Sbjct 739286 AAGATCTGCATATT 739273 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || || || | ||| | || |||| |||| ||| || || ||||| Sbjct 740606 TCCTTCTGAATATTGTAATCAGCAAGAGTGCGACCATCCTCCAACTGCTTCCCTGCAAAG 740547 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||||| || ||| Sbjct 740546 ATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTG 740487 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | |||||| |||| ||| || || || || ||||| ||||| || Sbjct 740486 TCGATCGTATCAGAGCTCTCAACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTGACG 740427 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 740426 AAGATCTGCAT 740416 Score = 98.7 bits (108), Expect = 6e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| || || ||||| | ||| | || | || || ||||| |||||| Sbjct 740384 GTGCTCTCCTTCTGGATATTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGCTTTCCG 740325 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| | || | |||||||||||| ||||| || Sbjct 740324 GCGAAGATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTA 740265 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | |||| || | ||| || |||| ||| || || || || ||||| || Sbjct 740264 ACGTTGTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTT 740205 Query 34965 TTCACAAAGATCTGCAT 34981 ||||||||||||||||| Sbjct 740204 TTCACAAAGATCTGCAT 740188 >seq6147 Length=2276951 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | | | |||| ||| | ||| || ||||| ||||| ||||| | Sbjct 1403066 CCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1403007 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| |||||||| || || || || |||||||| |||| Sbjct 1403006 AGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGA 1402947 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | ||||||||||| ||||| ||||| || | ||||| || || || Sbjct 1402946 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAGGATTC 1402891 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||| ||||||||| || ||||| || || ||||| ||||||||||| Sbjct 1402890 GACCTCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 1402840 >seq6563 Length=399665 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/216 (71%), Gaps = 12/216 (6%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC--CGAAAGGCTTCGTTCATCA 34829 ||| | ||||| ||| || ||||||||||| || || | |||| | | | |||| Sbjct 389013 AACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAG--TCCTTCCATCG 389070 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||||||| || || ||||| || || | |||||||| |||| | ||||||||||| Sbjct 389071 TCCAGCTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 389130 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTAT 34945 ||||||| ||||| || |||| || | ||| || ||| || || | || || Sbjct 389131 TGAATCTTCGCCTTGAC--AT--TATCAATAGTGTCCGAGCTCTCGACCTCCAAAGTGAT 389186 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || || | ||||| |||||||||||||| Sbjct 389187 GGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 389222 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || || ||||| ||||| | || | || | || |||||||| ||||| ||||| Sbjct 390171 TTCCTTTTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCCAGCTGCTTTCCCGCAAA 390230 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | |||||||| | || | || |||||||| ||||| ||||| Sbjct 390231 GATCAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 390290 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | ||| | ||||| || | ||||||||| ||||| ||||| ||||| || Sbjct 390291 GTCAATTGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTCTTTCCGGTGAGGGTCTTTAC 390350 Query 34970 AAAGATCTGCATA 34982 |||||||||||| Sbjct 390351 GAAGATCTGCATA 390363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324509758469928