Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq8682 125 6e-24 seq9707 120 2e-22 seq6563 114 1e-20 seq3222 107 2e-18 seq10231 104 2e-17 seq6147 95.1 1e-14 >seq8682 Length=358022 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| ||||| || || ||||| || ||||||||||| | |||| | | || || Sbjct 101329 ACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCAAGGGTTCGGCCGTCCTCG 101388 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || |||| | ||| || || || || || || || || |||||| Sbjct 101389 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCTTGA 101448 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| ||| | || | |||||||| ||||||| || || |||| || ||| Sbjct 101449 ATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTG 101508 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | |||||| ||||| |||||||| Sbjct 101509 CCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||||||||||||||| || || || ||||||||||| | |||| | || || Sbjct 101101 ACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCGACCGTCTTCA 101160 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || || || |||| | ||| || || || || ||||| || ||||||||| Sbjct 101161 AGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCTTGA 101220 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||||| | || | |||||||| | || || ||||| || | ||||| Sbjct 101221 ATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTCTCAACCTCAAGGGTAATGGTTTTC 101280 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || |||||||| Sbjct 101281 CCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 >seq9707 Length=1014798 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || |||||||| || || || ||||||||||| || | ||| | |||| ||||| ||| Sbjct 740618 TGGAGGGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTGCGACCATCCTCCAACTGC 740559 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | |||||| || || || |||||||| || || || ||||| || Sbjct 740558 TTCCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTC 740499 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | || ||||| | || || || || |||| ||| |||||||| Sbjct 740498 GCCTTCACGTTGTCGATCGTATCAGAGCTCTCAACCTCGAGGGTGATCGTCTTGCCGGTG 740439 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | || || || || |||||||| | | |||||| Sbjct 740438 AGGGTCTTGACGAAGATCTGCATCCCTCCACGAAGA 740403 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || || || || || |||||||||||||| | |||| | | || ||||| || Sbjct 739707 ATGGAGCGTTGACTCCTTCTGGATATTGTAATCGGCTAGGGTTCGGCCGTCCTCCAACTG 739648 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||| | ||| ||||| |||||||| ||||| ||||| || || || Sbjct 739647 CTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGAATTCCTTCCTTATCCTGGATCTT 739588 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| || | || | ||||| || | || ||||| || || | || |||||||| Sbjct 739587 GGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCGACTTCTAGGGTTATAGTCTTGCCGGT 739528 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | ||||| || || |||||||| |||||||| Sbjct 739527 GAGGGTTTTGACGAAGATCTGCATACCGCCGCGAAGA 739491 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || |||||||||||||||| || | | || |||| ||||| || || || Sbjct 739922 TCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCCTCCAGCTGCTTTCCGGCGAAG 739863 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 |||| | || |||||||| ||||| ||||| || ||||| || || || || | Sbjct 739862 ATCAGCCTTTGCTGATCGGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTG 739803 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | ||||| || | ||||| ||||| |||| ||| |||||||| | || || || Sbjct 739802 TCGATGGTGTCGGAACTCTCCACCTCAAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACG 739743 Query 101459 AATATCTGCAT 101469 || |||||||| Sbjct 739742 AAGATCTGCAT 739732 >seq6563 Length=399665 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || ||||| || |||||||| || | || || |||| || | ||| Sbjct 389476 TGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTCCTACCATCCTCAAGCTGC 389535 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || ||||| || |||| | ||| || || || || ||||| || || |||||||| ||| Sbjct 389536 TTCCCTGCGAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTT 389595 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||||||||||| |||| || || || || Sbjct 389596 GCCTTCACATTATCAATCGTGTCTGAGCTCTCCACTTCAAGGGTGATGGTCTTCCCTGTA 389655 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 389656 AGGGTCTTGACAAAAATCTGCAT 389678 >seq3222 Length=516221 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| | |||||| || || || ||||| || |||||||| || | ||| || |||| Sbjct 55208 AAAACCAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCAGCAAGAGTCCTCCCATCT 55267 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||||||||| || ||||| ||||| | ||| ||||| ||||| || ||||| ||||| Sbjct 55268 TCCAATTGCTTCCCAGCAAAAATCAATCTCTGCTGATCAGGCGGGATTCCTTCCTTATCC 55327 Query 101378 TGAA 101381 |||| Sbjct 55328 TGAA 55331 >seq10231 Length=688147 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301 ||||||||| | | | ||| | ||||| || || || || || || || || ||||| Sbjct 310304 TCCTCCTCTGAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCGGC 310363 Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 || |||| | | || || | || || || || || |||| ||||| || ||||| || Sbjct 310364 GAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 310423 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 || ||||| || || || || || || ||| | || | |||||||| | ||||| Sbjct 310424 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCCAC 310483 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || || || | || ||||| |||| ||||| || || |||||||||||| Sbjct 310484 CTCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCATGGTT 310535 >seq6147 Length=2276951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| ||||||| || | | | || || | ||| Sbjct 1403042 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGC 1402983 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| || || ||||||||||| || || || || || || Sbjct 1402982 TTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTG 1402923 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||| || || || || | || || || ||| Sbjct 1402922 GCCTTGACATTGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTTATGGTCTTACCCGTT 1402863 Query 101447 AAAGTTTTTACAAATATCTGCATGGTT 101473 | ||||| || || |||||||||||| Sbjct 1402862 AGGGTTTTCACGAAGATCTGCATGGTT 1402836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396127227344457