Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq11707 168 1e-36 >seq11707 Length=330502 Score = 168 bits (186), Expect = 1e-36 Identities = 545/850 (64%), Gaps = 10/850 (1%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||||||||||||||||||| || ||| |||||||||||| ||| | ||| Sbjct 115989 GAGATCTGGGAGATGTACAAGAAGGCGGAAGCCTCCTTCTGGACCGCCGAGGAGGTCGAT 116048 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 || || ||||| | | | | || ||| || |||||| |||| || ||| Sbjct 116049 CTCTCCCAGGACGTCCTCCAATTCGAAGCCCTAACCCCCGACGAGAAGCACTTCATCACC 116108 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || |||||||| ||||| || || || || |||||||| | || Sbjct 116109 CACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTCCTAGAGAATCTCGCAGGAAGG 116168 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || || ||| || ||||||| ||||| || |||||||| |||||| Sbjct 116169 TTCATGAAAGAGGTCCAGGTCGCGGAGGCCCGCGCCTTCTATGGCTTCCAGATCGCCATC 116228 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||| ||| |||| | |||||| | | ||||| | || ||| Sbjct 116229 GAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGTCTTACATCAAGGATTCCGCT 116288 Query 25774 GAGAGAGATCGGC-TGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 |||| ||| | || | || || ||||| | | || |||| | |||||| | Sbjct 116289 GAGA-AGACCCGCCTCTTCCACGCAATCGACACCGTCCCTTGCATTGCCAAGAAGGCCCA 116347 Query 25833 GTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 ||||||| | |||||| | | | ||| || ||| |||||| | | |||| Sbjct 116348 GTGGGCCCTCCGCTGGATCGATGGTTCCGAGTCCT----TTGCCGAGCGCATCATCGCCT 116403 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951 | ||| || ||||| ||||| ||| ||| || ||||| |||||||||||| Sbjct 116404 TCGCTTGCGTCGAGGGGATCTTCTTCTCCGGAAGCTTCTGTGCCATTTTCTGGCTCAAGA 116463 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 || |||| ||||| || || ||| ||||||||||| ||| | |||||||| | Sbjct 116464 AGCGGGGGTTAATGCCGGGACTCACCTTCTCCAACGAGCTGATCTCGCGAGACGAGGGCC 116523 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG 26071 | ||| | ||||| |||||||| |||||| | || | || | || | | | Sbjct 116524 TGCACTGCGATTTCGCCTGCCTTCTCTACTC---CCTCCTGAGGAAGAAGCTGAGCGAGG 116580 Query 26072 AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNN 26131 || ||| | |||| || | || ||||||||||||| ||||||| Sbjct 116581 AGCGAGTCAAGGCTATCGTCCGCAACGCGGTGGAGATCGAGAGGGAGTTTGTGTGCGACG 116640 Query 26132 NNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATG 26191 | || |||||| | | |||||||| ||||| |||| | Sbjct 116641 CGCTGCCGTGTGCGTTGGTCGGGATGAACGGCGCGTTGATGAGCCAGTACATCGAGTTCG 116700 Query 26192 TGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGT 26251 | ||||||| || || | ||| || || | | ||| || | ||||||| Sbjct 116701 TCGCCGACCGGCTCTTGGGTGCGCTTGGGTGCGGGAAGGTGTACGGTGTTCAAAACCCGT 116760 Query 26252 TCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCG 26311 | || | ||||| || |||||| | ||||||||||||||||| || |||||||| | Sbjct 116761 TTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAGACCAACTTCTTCGAGAAGAGGGTGG 116820 Query 26312 GCGACTATCA 26321 | || || || Sbjct 116821 GTGAGTACCA 116830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928481377861440