Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq10231 95.1 2e-14 >seq10231 Length=688147 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || |||||||||| | |||| || || | ||||||||||| || || | | | Sbjct 310350 ATGTTATAGTCGGCGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGGCGC 310409 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || || ||||| |||||||| || || || || |||| || | ||| || || Sbjct 310410 TGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTG 310469 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || ||||| || ||||| |||||||| || || ||||| ||||| || || || ||| Sbjct 310470 TCAGAGGACTCCACCTCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGC 310529 Query 193359 AT 193360 || Sbjct 310530 AT 310531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899302398970320