Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq8682 107 2e-18 seq6563 87.8 1e-12 seq9707 86.0 5e-12 >seq8682 Length=358022 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||||||||| || || | || ||||| ||||||||| | || || ||| | Sbjct 100625 ATGCAAATTTTTGTGAAGACACTCACTGGCAAGACCATTACCTTGGAGGTAGAAAGCTCG 100566 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || || || ||| || || || ||| | ||| ||| || Sbjct 100565 -GACACAATCGACAATGTTAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCGGACCA 100507 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | ||||||||| ||||| ||||||| || || | ||||||||||| Sbjct 100506 GCAGAGGTTGATCTTTGCGGGTAAGCAGCTCGAGGACGGCAGGACCCTTGCGGACTACAA 100447 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || |||||||| || | ||| ||||| || | |||| || || Sbjct 100446 CATCCAGAAGGAGTCGACACTTCACTTGGTGCTGCGTCTGCGTGGTGG 100399 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| |||||| | || ||||| ||||| ||| |||| ||| ||| Sbjct 101537 ATGCAGATCTTTGTGAAAACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 101478 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | || ||| |||||| || || || || | || ||| || Sbjct 101477 -GACACCATCGATAATGTCAAAGCTAAGATTCAAGACAAGGAGGGTATCCCACCGGACCA 101419 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | || || || ||||| ||||||| | ||| | || || ||||| Sbjct 101418 GCAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTTGCCGATTACAA 101359 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||||||||||||| || | || ||||| Sbjct 101358 CATTCAAAAGGAGTCCACCCTCCATTTGGTG 101328 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| |||||||| || || | || || || || || ||| | || ||| ||| | Sbjct 100397 ATGCAGATTTTTGTGAAGACCCTTACCGGGAAGACGATCACCTTGGAGGTCGAGAGCTCG 100338 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || || |||||| || || || ||| | ||| || || Sbjct 100337 -GACACCATTGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 100279 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| ||||| ||||| ||||||| | || ||||||||||||| Sbjct 100278 GCAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGGAGGACCCTGGCGGACTACAA 100219 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||| || ||||||||||| Sbjct 100218 CATCCAGAAGGAGTCTAC 100201 >seq6563 Length=399665 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGCTGG 107614 ||||| |||||||| || || | || || || ||||| ||| | ||| || | ||| Sbjct 389906 ATGCAGATTTTTGTTAAGACCCTTACGGGAAAGACCATCACCCTGGAAGTCGAAAGCTCT 389847 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | ||||| |||||| ||||| || ||| | || || || Sbjct 389846 -GACACGATTGACAATGTAAAGGCCAAGATTCAGGATAAGGAGGGCATCCCACCAGACCA 389788 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | |||||| || ||||| ||||| | | || | || |||||||| Sbjct 389787 GCAGAGGCTCATCTTTGCGGGGAAGCAGCTTGAGGATGGAAGGACCCTTGCTGACTACAA 389728 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||||||||||||| || | ||| |||| Sbjct 389727 CATTCAAAAGGAGTCCACCCTCCACTTGGT 389698 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 || || |||||| | || ||| |||||||| || || | |||||| || ||||||||| Sbjct 390269 GACAAGGAAGGCATCCCACCGGACCAGCAGAGGCTGATCTTTGCGGGAAAGCAGCTGGAG 390210 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||| | || |||| ||||||||||| |||||||| || || | ||| |||| Sbjct 390209 GACGGCCGCACTCTGGCCGACTACAACATCCAAAAGGAATCGACTCTCCACCTGGT 390154 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| ||||||||||| || | ||||| || ||||| ||| | ||| |||| ||| Sbjct 389679 AATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAAGTGGAGAGCTC 389620 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 || || | | | || || ||||||| || || || ||| | || || | Sbjct 389619 A-GACACGATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATCCCACCAGACC 389561 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| || |||| || || || ||||| ||||| | | || | || || |||| Sbjct 389560 AGCAGAGGCTGATTTTCGCAGGGAAGCAGCTTGAGGATGGTAGGACCCTTGCTGATTACA 389501 Query 107734 ACATTCAAAAGGAGTCTAC 107752 |||||||||||||||| || Sbjct 389500 ACATTCAAAAGGAGTCCAC 389482 >seq9707 Length=1014798 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || |||||||| | || ||||| || || ||| | ||| ||| ||| Sbjct 739504 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACTATAACCCTAGAAGTCGAGAGCTC- 739562 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | | || ||| ||||| ||||| ||||| | || |||||| Sbjct 739563 CGACACGATCGACAACGTCAAAGCCAAGATCCAGGATAAGGAAGGAATTCCGCCGGATCA 739622 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | || || || ||| ||||||||| | ||| | || || ||||| Sbjct 739623 GCAGAGGCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACCCTAGCCGATTACAA 739682 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| ||| | || ||||| Sbjct 739683 TATCCAGAAGGAGTCAACGCTCCATCTGGTG 739713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398724636104389