Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq8682 152 4e-32 seq6563 116 3e-21 seq9707 107 1e-18 seq6147 107 1e-18 >seq8682 Length=358022 Score = 152 bits (168), Expect = 4e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||||||| || ||||| || ||||||||||| ||||| |||| ||| || Sbjct 101323 CGGAGCACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCAAGGGTTCGGCCG 101382 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || ||||| || | |||| || ||||| ||||| || |||||||| ||| Sbjct 101383 TCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTG 101442 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | ||||||| | || | |||||||| ||| || || || || || Sbjct 101443 TCTTG-AATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGAT 101501 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||||| ||||| |||||||| Sbjct 101502 GGTCTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| || ||||| || |||||||| ||||| |||| ||| ||| Sbjct 101094 ACGGAGCACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCGACC 101153 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || ||||||||||| | |||| || ||||| || || || || ||||| || Sbjct 101154 GTCTTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTT 101213 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | || || | || | |||||||| || || ||||| || | Sbjct 101214 ATCTTG-AATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTCTCAACCTCAAGGGTAA 101272 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | ||| || || || |||||||| Sbjct 101273 TGGTTTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||||||||| ||||| || || || || || ||||| || |||||| Sbjct 100399 CCACCACGCAGACGCAGCACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGCA 100458 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || ||||| || || || ||| | ||||| || ||||| ||||| ||| Sbjct 100459 AGGGTCCTGCCGTCCTCGAGCTGCTTACCCGCAAAGATCAACCTCTGCTGGTCCGGGGGA 100518 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || |||||| | || ||| | || | ||||| || |||||| Sbjct 100519 ATGCCCTCCTTGTCCTG-AATTTTGGCCTTAACATTGTCGATTGTGTCCGAGCTTTCTAC 100577 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || |||||||| | || || ||||| || ||||| Sbjct 100578 CTCCAAGGTAATGGTCTTGCCAGTGAGTGTCTTCACAAAAATTTGCAT 100625 >seq6563 Length=399665 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||| || ||||||||||| ||||| |||| ||| | | Sbjct 389463 ACGAAGGACAAGGTGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTCCTACC 389522 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || || | |||| || ||||| || || || || ||||| || Sbjct 389523 ATCCTCAAGCTGCTTCCCTGCGAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 389582 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| |||| || ||| | || | ||||| || || |||||||| || | Sbjct 389583 GTCTTG-AATCTTTGCCTTCACATTATCAATCGTGTCTGAGCTCTCCACTTCAAGGGTGA 389641 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || || || || | ||| || ||||| ||||||||| Sbjct 389642 TGGTCTTCCCTGTAAGGGTCTTGACAAAAATCTGCATT 389679 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || ||||| || ||||||||||| || || |||| ||| | Sbjct 389691 ACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGGGTCCTTCC 389750 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | || ||||| || || || || ||||| || Sbjct 389751 ATCCTCAAGCTGCTTCCCCGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 389810 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | || ||| | || | |||||||| ||| ||||| || || | Sbjct 389811 ATCCTG-AATCTTGGCCTTTACATTGTCAATCGTGTCAGAGCTTTCGACTTCCAGGGTGA 389869 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | ||| |||||||| |||||||| Sbjct 389870 TGGTCTTTCCCGTAAGGGTCTTAACAAAAATCTGCAT 389906 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || || || || || |||||||||||||||| || | Sbjct 389919 ACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCC 389978 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || ||||| | || | || ||||| || ||||| || || || || Sbjct 389979 GTCCTCAAGCTGCTTTCCAGCGAAAATGAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTT 390038 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || |||||| | || | || || ||| ||| || ||||| ||||| Sbjct 390039 GTCTTGGATCTTAGCCTTGACATTGTCAATCGTATCGGAACTTTCGACCTCAAGGGTTAT 390098 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || ||||| | || ||||| || || ||||| Sbjct 390099 AGTCTTTCCAGTGAGTGTCTTAACGAAGATTTGCAT 390134 >seq9707 Length=1014798 Score = 107 bits (118), Expect = 1e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| || ||||| || || || ||||| || || || | ||| || Sbjct 725474 ACGAAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCC 725415 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| ||||| || || | |||| | ||||| ||||||||||| ||||| || Sbjct 725414 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATTCCCTCCTT 725355 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| || || || || ||||| || Sbjct 725354 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGAT 725295 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| |||| |||||| || || |||||||| || Sbjct 725294 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATATT 725256 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| ||| ||||| || || || || || || ||||| || | ||| || || Sbjct 739715 AGCACCAGATGGAGCGTTGACTCCTTCTGGATATTGTAATCGGCTAGGGTTCGGCCGTCC 739656 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || ||||| || | |||| || ||||||||||||||||| || || || || Sbjct 739655 TCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGAATTCCTTCCTTATCC 739596 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || |||||| | || | ||||| || || ||||| || |||||||| Sbjct 739595 TGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCGACTTCTAGGGTTATAGTC 739536 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | |||||| || || |||||||| Sbjct 739535 TTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 739504 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || |||| ||| || ||| || || || || || ||||| || Sbjct 739958 CCTCCGCGAAGACGAAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAATCGGCG 739899 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || || || || || || || | |||| ||||||||||| || ||| Sbjct 739898 AGGGTACGACCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCGGGAGGA 739839 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | || || || | || | ||||| ||| || || Sbjct 739838 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCACC 739779 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || | ||| || || || |||||||| Sbjct 739778 TCAAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 739732 >seq6147 Length=2276951 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | || ||||||| || || ||||| || || || ||||| || || || Sbjct 1403066 CCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1403007 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || ||||| || || || || | || | | ||||| ||||||||| Sbjct 1403006 AGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGA 1402947 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || |||||| | || | ||||| || ||| || Sbjct 1402946 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACC 1402887 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || |||| |||||| || || |||||||| Sbjct 1402886 TCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 1402840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385072246218441