Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq6563 145 1e-29 seq8682 136 8e-27 seq9707 125 1e-23 seq10231 122 2e-22 >seq6563 Length=399665 Score = 145 bits (160), Expect = 1e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | ||| || || ||||| ||||| || || ||||| | Sbjct 389224 CCACCCCTCAGACGCAGCACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCTGCG 389283 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | ||||| ||||| ||||| || || || || || || || || |||||||| || Sbjct 389284 AGGGTCCTACCATCTTCGAGTTGCTTCCCGGCGAAAATCAGCCTCTGCTGATCTGGGGGA 389343 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || ||||| |||||||||||||| || ||||| ||||| || || || | || || Sbjct 389344 ATGCCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATTGTGTC-CGAGCTCTCCAC 389402 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||| | || || ||||| ||||| | ||||| || || ||||||||| Sbjct 389403 TTCGAGGGTGATGGTCTTCCCTGTAAGGGTCTTAACGAAAATCTGCATT 389451 Score = 138 bits (152), Expect = 2e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||| || || || || ||||| || |||||||| | ||| | || || Sbjct 389919 ACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCC 389978 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || |||||||| || || || || || || ||||| || || |||||||| Sbjct 389979 GTCCTCAAGCTGCTTTCCAGCGAAAATGAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTT 390038 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| ||||| || || ||||| ||||||||||| | ||| || || | ||||| Sbjct 390039 GTCTTGGATCTTAGCCTTGACATTGTCAATCGTATCGGAACTTTCGACCTCAAGGGTTAT 390098 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | ||||| || || || ||||| Sbjct 390099 AGTCTTTCCAGTGAGTGTCTTAACGAAGATTTGCAT 390134 Score = 129 bits (142), Expect = 1e-24 Identities = 161/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || || || || || || || ||||||| || | ||||| Sbjct 389463 ACGAAGGACAAGGTGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTCCTACC 389522 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || || || || || || || || || ||||| || || || ||||| Sbjct 389523 ATCCTCAAGCTGCTTCCCTGCGAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 389582 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 |||||||||||||| || ||||| |||||||| || | || | || ||||| | || | Sbjct 389583 GTCTTGAATCTTTGCCTTCACATTATCAATCGTGTC-TGAGCTCTCCACTTCAAGGGTGA 389641 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | ||||| ||||| | ||||| ||||| ||||||||| Sbjct 389642 TGGTCTTCCCTGTAAGGGTCTTGACAAAAATCTGCATT 389679 Score = 120 bits (132), Expect = 6e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| || ||||| ||||| || || || || |||| Sbjct 390362 TACCGCCACGGAGACGGAGGACCAAGTGGAGGGTAGACTCTTTTTGGATGTTGTAGTCAG 390421 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||||| || || || |||||||| ||||| | ||||||||||| || | Sbjct 390422 CAAGAGTACGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAACCTTTGTTGATCCGGGG 390481 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | ||||| ||||| || || || || ||||| || || ||||| || || | || | || Sbjct 390482 GGATTCCCTCCTTGTCCTGGATTTTAGCTTTGACGTTGTCAATGGTGTC-TGAGCTCTCG 390540 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | ||| || ||||| || || | || || || || || ||||| Sbjct 390541 ACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCAT 390590 >seq8682 Length=358022 Score = 136 bits (150), Expect = 8e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| ||| ||||| || || || || ||||| || || || || | || | | || Sbjct 100638 ACGCAAAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGCCC 100697 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || ||||| || |||||||| | || || |||||||| || || || ||||| Sbjct 100698 ATCTTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCCTCCTT 100757 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG-GTTCTACTTCCAAAGTTA 82773 ||||||||||| || || ||||| ||||| || || | || ||| || ||||| || | Sbjct 100758 GTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTC-TGAGCTTTCAACCTCCAATGTGA 100816 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || | ||||| ||||| |||||||| Sbjct 100817 TGGTCTTGCCAGTGAGGGTCTTAACAAAAATCTGCAT 100853 Score = 136 bits (150), Expect = 8e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || || || || |||||||| ||||| || || ||||| | || ||| ||| Sbjct 101094 ACGGAGCACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCGACC 101153 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || ||||| ||||| ||||| || || || || ||||| || || || ||||| Sbjct 101154 GTCTTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTT 101213 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 |||||||||||| || ||||| || ||||| || ||| || | || || || | || | Sbjct 101214 ATCTTGAATCTTGGCCTTTACGTTATCAATGGTGTCA-GAGCTCTCAACCTCAAGGGTAA 101272 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || || | ||||| || || |||||||| Sbjct 101273 TGGTTTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || || || || || || || || || || ||||| | || ||| ||| Sbjct 101323 CGGAGCACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCAAGGGTTCGGCCG 101382 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || || || ||||| || || || || || || || || || ||||| Sbjct 101383 TCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTG 101442 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| ||||| ||||| || || || ||| ||| || || | || || Sbjct 101443 TCTTGAATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATG 101502 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | || || ||||| |||||||| Sbjct 101503 GTCTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 >seq9707 Length=1014798 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | ||| || || | || ||||| || ||||| ||||| ||||| | Sbjct 739960 TACCTCCGCGAAGACGAAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAATCGG 739901 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | |||||| || || || ||||| || ||||| || ||||| ||||| |||| Sbjct 739900 CGAGGGTACGACCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCGGGAG 739841 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| ||||| ||||| || || || || || || || || | || | Sbjct 739840 GAATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCA 739781 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || ||||||||||| || | ||||| || || |||||||| Sbjct 739780 CCTCAAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 739732 Score = 118 bits (130), Expect = 2e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| ||||| ||||| | ||| ||| ||||| || | || Sbjct 739706 TGGAGCGTTGACTCCTTCTGGATATTGTAATCGGCTAGGGTTCGGCCGTCCTCCAACTGC 739647 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| || || || ||||| || || |||||||||||||| || ||||| Sbjct 739646 TTGCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGAATTCCTTCCTTATCCTGGATCTTG 739587 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| || || || ||||| || || | || ||||| | ||||| |||||||| || Sbjct 739586 GCTTTGACGTTGTCGATCGTGTC-GGAGCTCTCGACTTCTAGGGTTATAGTCTTGCCGGT 739528 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| Sbjct 739527 GAGGGTTTTGACGAAGATCTGCAT 739504 Score = 118 bits (130), Expect = 2e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || ||||| || ||||| ||||| ||||||| ||| | | ||| Sbjct 740631 ACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGAATATTGTAATCAGCAAGAGTGCGACC 740572 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || || || |||||||| || | || || || || || || || ||||| Sbjct 740571 ATCCTCCAACTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 740512 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || |||||||| || || || || || ||||||||| || | || || || | || | Sbjct 740511 GTCCTGAATCTTCGCCTTCACGTTGTCGATCGTATCAG-AGCTCTCAACCTCGAGGGTGA 740453 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| || | ||||| || || |||||||| Sbjct 740452 TCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 740416 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | || ||||| || ||||| ||||||||||| | || | | |||| Sbjct 740174 CGAAGAACAAGATGGAGAGTGCTCTCCTTCTGGATATTATAATCGGCGAGGGTGCGACCG 740115 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || || || ||||| || || || || || || || ||||||||||| Sbjct 740114 TCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATTCCTTCCTTG 740055 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || || || || || || || ||| ||||| | |||| Sbjct 740054 TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAACTTCTAGGGTTACG 739995 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||| | || || ||||| |||||||| Sbjct 739994 GTCTTGCCTGTTAGGGTTTTCACAAAGATCTGCAT 739960 Score = 105 bits (116), Expect = 1e-17 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| || || ||||| || ||||| || | Sbjct 739504 TACCGCCGCGAAGACGAAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGG 739445 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || ||| |||||||| || |||||||| || ||||| || | || || || || | Sbjct 739444 CGAGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCG 739385 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | ||||||||||| || || ||||| || || || || || || || || || | || Sbjct 739384 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTC-GGAGCTCTCG 739326 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | ||| || |||||||| || | || || || || |||||||| Sbjct 739325 ACCTCGAGAGTGATGGTCTTGCCGGTTAGTGTTTTCACGAAGATCTGCAT 739276 Score = 89.7 bits (98), Expect = 1e-12 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || || | || ||||| || ||||| ||||| || || | Sbjct 740414 CCTCCACGAAGACGAAGCACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCG 740355 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||| || || || ||||| || ||||| || | || || || ||||| Sbjct 740354 AGGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 740295 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || ||||| || || ||||| || || || || || ||||| || || | || || Sbjct 740294 ATCCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCG-AGCTCTCGAC 740236 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || ||||||||||| || | || || ||||| |||||||| Sbjct 740235 CTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 740188 >seq10231 Length=688147 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | | ||||| | ||| || || || || ||||| || ||||| || | Sbjct 310305 CCTCCTCTGAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCGGCG 310364 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| ||||| || || |||||||| || ||||| || | || || || ||||| Sbjct 310365 AGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 310424 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || || ||||| || || ||||| || || || ||| | || || Sbjct 310425 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCCACC 310484 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||||| |||||||| || | || || || || |||||||| Sbjct 310485 TCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCAT 310531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981433444031039