Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq9707 107 1e-18 seq8682 96.9 2e-15 seq6147 95.1 8e-15 seq10231 87.8 1e-12 >seq9707 Length=1014798 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| ||||||||||| || || || |||||||||| ||| || || |||| ||| Sbjct 739940 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCCTCC 739881 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || |||||||| || |||| | |||||||| | || | ||||| ||||| Sbjct 739880 AGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCGGGAGGAATTCCTTCCTTGTCTTGG 739821 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || ||| || | ||| | ||||||| ||||| |||| ||||||||| || Sbjct 739820 ATCTTGGCCTTC-ACGTTGTCGATGGTGTCGGAACTCTCCACCTCAAGCGTGATCGTCTT 739762 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || |||||||||||| Sbjct 739761 GCCGGTGAGGGTCTTGACGAAGATCTGCATA 739731 Score = 100 bits (110), Expect = 2e-16 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||||| ||| ||||||||||| || || || ||||| |||| ||| ||||| | Sbjct 740403 ACGAAGCACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCGAGGGTGCGCCC 740344 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || |||||||| || |||| ||||||||| || | || | || || || Sbjct 740343 GTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTT 740284 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTG 33711 ||| || || | | ||| | ||| | ||||| | | | || || || | ||| Sbjct 740283 GTCCTGGATCTT-GGCCTTAACGTTGTCGATCGTGTC-CGAGCTCTCGACCTCGAGGGTG 740226 Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || || || | ||||| |||||||||||||| Sbjct 740225 ATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 740188 Score = 98.7 bits (108), Expect = 7e-16 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||||| ||| |||||| ||| || || ||||| || |||| ||| || || | Sbjct 739491 ACGAAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCC 739432 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | ||||||||||| || |||| ||||||||| || |||| | ||||| || Sbjct 739431 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATTCCTTCCTT 739372 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || | | || | ||| | ||||||| || || || | |||| Sbjct 739371 GTCCTGGATCTT-GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGA 739313 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 | || || || |||| ||||| || |||||||||||| || Sbjct 739312 TGGTCTTGCCGGTTAGTGTTTTCACGAAGATCTGCATATTT 739272 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| |||||| ||| || || |||||||| |||| ||| || || |||| || Sbjct 725467 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCGTCTTCG 725408 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||||||||| || |||| ||||||||| || |||| | || || ||||| Sbjct 725407 AGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGG 725348 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | | || | ||| | ||||||| || || || | ||||| || || Sbjct 725347 ATCTT-GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTT 725289 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 || |||| ||||| || |||||||||||| || Sbjct 725288 GCCGGTTAGGGTTTTCACGAAGATCTGCATATTT 725255 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| ||||||||||| || || || || ||||||| ||| ||||| |||| || | || Sbjct 740163 ATGGAGAGTGCTCTCCTTCTGGATATTATAATCGGCGAGGGTGCGACCGTCCTCGAGCTG 740104 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| || || | | |||||| || |||| | ||||| ||||| || || Sbjct 740103 CTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTT 740044 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 ||| || | ||| | ||||||| ||| || || | || | || || |||| Sbjct 740043 GGCCTTC-ACGTTGTCGATGGTGTCGGAGCTTTCAACTTCTAGGGTTACGGTCTTGCCTG 739985 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 ||| ||||| ||||||||||||||| Sbjct 739984 TTAGGGTTTTCACAAAGATCTGCATA 739959 >seq8682 Length=358022 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || | ||||||||| || ||| ||| ||||| ||||||||||||| Sbjct 101310 ACCACCACGGAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGC 101369 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| || | || || ||||| || |||| | |||||| || | || Sbjct 101370 AAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGG 101429 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||| || ||||| ||| || | || |||| || | |||||| ||| || Sbjct 101430 GATACCCTCCTTGTCTTGAATCTT-AGCTTTGACATTATCGATGGTGTCAGAGCT---TT 101485 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || | ||||| || || || || | ||||| |||||||||||||| Sbjct 101486 CCACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 >seq6147 Length=2276951 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| |||| ||| || || |||| || Sbjct 1403049 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTC 1402990 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || |||||||| || || | |||||||| || |||| | || || ||||| Sbjct 1402989 GAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTG 1402930 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || || | ||| ||| | ||||||| ||||| || || | || || || | Sbjct 1402929 GATCTTGGCCTTGA-CATTGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTTATGGTCT 1402871 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 |||| |||| ||||| || ||||||||||| |||| Sbjct 1402870 TACCCGTTAGGGTTTTCACGAAGATCTGCATGGTTG 1402835 >seq10231 Length=688147 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || ||||| || |||| ||| || || |||| || | ||||||||||| || Sbjct 310340 CTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 310399 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| |||||||| || | || | ||||| ||||| || || | | |||| Sbjct 310400 GATCAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTT-GGCCTTGACAT 310458 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || ||||| || | || || || || || |||| ||||| | Sbjct 310459 TGTCGATGGTGTCAGAGGACTCCACCTCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCA 310518 Query 33737 CAAAGATCTGCATAGTTGGT 33756 | ||||||||||| |||||| Sbjct 310519 CGAAGATCTGCATGGTTGGT 310538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328578605689920