Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq8682 104 2e-17 >seq8682 Length=358022 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||||||||| || | | | ||||| || || |||||||||||| || ||||||| | Sbjct 100639 CGCAAAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGCCCA 100698 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 |||||||||||||| |||| | |||| | | ||| |||||||| || ||||| || || Sbjct 100699 TCTTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCCTCCTTG 100758 Query 132029 TC 132030 || Sbjct 100759 TC 100760 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||||||||| || | | ||||||| || || |||||||||||| || |||||| | Sbjct 100867 CGCAAAACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGTCCA 100926 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || ||||||||||| |||| | |||| | | ||| || ||||| || || || || || Sbjct 100927 TCCTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTG 100986 Query 132029 TC 132030 || Sbjct 100987 TC 100988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476424719910360