Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq9707 116 3e-21 seq8682 102 7e-17 seq10231 98.7 8e-16 seq6563 84.2 2e-11 >seq9707 Length=1014798 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | |||| ||| | || || || || || || ||||||||| Sbjct 725486 GCCGCCGCGGAGACGAAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 725427 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | || |||||||||||||||| |||||| | || |||||||| || |||||||| Sbjct 725426 GAGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 725367 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| || | | | || | ||||| | | || || Sbjct 725366 AATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGAC 725307 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||||| || || |||||||| ||||| |||||| Sbjct 725306 CTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATA 725258 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||| ||| | ||| || || || || |||||||| ||| Sbjct 739730 CCGCCGCGAAGCCTGAGCACCAGATGGAGCGTTGACTCCTTCTGGATATTGTAATCGGCT 739671 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| || | ||| || |||||| | || || | ||| ||||||||||| Sbjct 739670 AGGGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGCGGA 739611 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || ||||| ||||||| ||| | | | || | ||||| | | || ||| Sbjct 739610 ATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCGACT 739551 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||||||| ||||| || || ||||| || ||||| |||||| Sbjct 739550 TCTAGGGTTATAGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCATA 739503 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || ||||| || ||| | | |||| |||| |||||||| || |||||| | Sbjct 740150 TCCTTCTGGATATTATAATCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTCCCGGCGAAG 740091 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || | ||| || |||||||| | || || || || ||||||| |||| | | Sbjct 740090 ATAAGCCTCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 740031 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | |||||||||||| |||| | ||||| || || ||||||||| Sbjct 740030 TCGATGGTGTCGGAGCTTTCAACTTCTAGGGTTACGGTCTTGCCTGTTAGGGTTTTCACA 739971 Query 27237 AAGATTTGCATAGCT 27251 ||||| |||||| || Sbjct 739970 AAGATCTGCATACCT 739956 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||| ||| | || || || || || || || |||||| Sbjct 739502 CCGCCGCGAAGACGAAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCG 739443 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||||||||||||||| |||||| | || |||||||| || |||||||| Sbjct 739442 AGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 739383 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| || | | | || | ||||| | | || || Sbjct 739382 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACC 739323 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||||| || || |||||||| ||||| |||||| Sbjct 739322 TCGAGAGTGATGGTCTTGCCGGTTAGTGTTTTCACGAAGATCTGCATA 739275 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || |||||||||||| | | ||||| |||| |||||||| || |||||| | Sbjct 740378 TCCTTCTGGATATTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAG 740319 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || |||||||| || ||||| || | ||||| || || ||||||| || | | | Sbjct 740318 ATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTG 740259 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | ||||| || || ||||||||| Sbjct 740258 TCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACA 740199 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 740198 AAGATCTGCAT 740188 >seq8682 Length=358022 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || |||||||| ||||| ||| | | | || |||| ||| Sbjct 101329 ACCAAATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCAAGGGTTCGGCCGTCCTCG 101388 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | || || | ||| || ||||| || | |||||| || || Sbjct 101389 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCTTGA 101448 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | ||||| | | ||| || || || || || | ||| Sbjct 101449 ATCTTAGCTTTGACATTATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTG 101508 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||||||||||||||| ||||| Sbjct 101509 CCAGTGAGAGTTTTCACAAAGATCTGCAT 101537 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || || || || ||||||||| || | | ||| | Sbjct 100639 CGCAAAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGCCCA 100698 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 |||||||||||||| ||||| | || | | ||| ||||| || || | ||||| || Sbjct 100699 TCTTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCCTCCTTG 100758 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| || | | || | ||||||| | |||||| || | || || Sbjct 100759 TCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTTTCAACCTCCAATGTGATG 100818 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || || || ||||| || ||||| Sbjct 100819 GTCTTGCCAGTGAGGGTCTTAACAAAAATCTGCAT 100853 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || || || || ||||||||| || | | || | Sbjct 100867 CGCAAAACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGTCCA 100926 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || ||||||||||| ||||| | || | | ||| || || || || | ||||| || Sbjct 100927 TCCTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTG 100986 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| ||||| | || | ||||| | |||||| || | || || Sbjct 100987 TCCTGAATCTTGGCTTTCACATTATCAATGGTGTCGGAACTTTCAACCTCCAAGGTGATG 101046 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || || || || || |||||||||||||| Sbjct 101047 GTTTTTCCGGTGAGGGTCTTAACAAAGATTTGCAT 101081 >seq10231 Length=688147 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| || | ||| || || || || || || |||||| | | | || |||| ||| Sbjct 310323 ACCAGGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCCGTCCTCG 310382 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| |||||| | || || ||||| || || || || | || || || || | Sbjct 310383 AGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGG 310442 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | || | ||||| | || || || ||||| ||||||| ||| Sbjct 310443 ATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCCACCTCTAGGGTTATAGTCTTG 310502 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || |||||||| ||||| ||||| Sbjct 310503 CCCGTTAGGGTTTTCACGAAGATCTGCAT 310531 >seq6563 Length=399665 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| |||||||| || |||||||| | | || |||| || Sbjct 390382 ACCAAGTGGAGGGTAGACTCTTTTTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCA 390441 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | || | | ||||||||||| || | ||||| || || | Sbjct 390442 AGCTGCTTTCCAGCGAAGATCAACCTTTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGG 390501 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || ||| | | | || | ||||||| | || || || ||||| || | || Sbjct 390502 ATTTTAGCTTTGACGTTGTCAATGGTGTCTGAGCTCTCGACCTCGAGAGTGATGGTCTTT 390561 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||||||| ||||||||||| Sbjct 390562 CCGGTGAGGGTTTTCACGAAGATTTGCAT 390590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424772295626712