Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq11707 183 3e-41 >seq11707 Length=330502 Score = 183 bits (202), Expect = 3e-41 Identities = 599/905 (66%), Gaps = 32/905 (4%) Strand=Plus/Plus Query 59530 TTCTCGCGCCGAGCACCGCGCGTTTCACAACCTTTCCTATACGGTACCCGGATCTGTGGG 59589 ||||||| |||| | | | || ||| | || || || | ||||||||| | |||| Sbjct 115939 TTCTCGCTCCGAACCCGGACCGGTTCTGTATGTTCCCAATCCAGTACCCGGAGATCTGGG 115998 Query 59590 CCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCC--GG 59647 |||| ||||| ||| | || |||||| ||| ||||||| | || ||| || || Sbjct 115999 AGATGTACAAGAAGGCGGAAGCCTCCTTCTGGACCGCCGAGGAGGTCGATCTCTCCCAGG 116058 Query 59648 A-GACCTGAAGGATTGGGACAAGCTCAATTAC--GACGAGCAGCATTTCATCAAGATGGT 59704 | | ||| | ||| | |||| | | | |||||| |||| ||||||| || Sbjct 116059 ACGTCCTCCA--ATTCG---AAGCCCTAACCCCCGACGAGAAGCACTTCATCACCCACGT 116113 Query 59705 CCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTC 59764 ||| |||||||| || || || || || || | || ||| | | || ||| || Sbjct 116114 CCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTCCTAGAGAATCTCG-CAGGAAGGTTCA 116172 Query 59765 C-AAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAG 59822 || || |||||| | || |||||||| | ||||| | | ||| ||| || |||| Sbjct 116173 TGAAAGAGGTCCAGGTCGCGGAGGCCCGCGCCTTCTATGGCTTCCAGATCGC-CATCGAG 116231 Query 59823 TCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAG 59882 ||||||||||||| |||| ||| | | || | |||||||| | | ||| Sbjct 116232 AACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGTCTTACATCAAGGATTCCGCTGAG 116291 Query 59883 AAGGCTGGTCTGTTCCGTGCCATAGAGAC-GTCCCCCGCAGTTAAACAAAAAGCAGAATG 59941 ||| | | || |||| || || || || ||||| ||| | | | || || | || Sbjct 116292 AAGACCCGCCTCTTCCACGCAATCGACACCGTCCCTTGCATTGCCA-AGAAGGCCCAGTG 116350 Query 59942 GGCCATGCAGTGGAT-GA--GTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGC 59998 |||| | | ||||| || || | | || || ||||| | || |||| || || || Sbjct 116351 GGCCCTCCGCTGGATCGATGGTTCCG-AG--TCCTTTGCCGAGCGCATCATCGCCTTCGC 116407 Query 59999 ATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCG 60058 ||||| || || ||||||||||| || |||||||| |||||||||||||| ||||| Sbjct 116408 TTGCGTCGAGGGGATCTTCTTCTCCGGAAGCTTCTGTGCCATTTTCTGGCTCAAGAAGCG 116467 Query 60059 TGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 || | |||||||| || | ||||||||||||||||| || || ||||||||||| || Sbjct 116468 GGGGTTAATGCCGGGACTCACCTTCTCCAACGAGCTGATCTCGCGAGACGAGGGCCTGCA 116527 Query 60119 TCAGGAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATA 60177 || || || || | ||||| || | ||| |||| || | | |||| Sbjct 116528 CTGCGATTTCGC-CTGCCTTCTCTACTCCCTCCT-GAGGAAGAA--GCTGAGCGAGGAGC 116583 Query 60178 TTCACAAG---ATTGTTCAGTGGGCTTGTGAAG-TGGAGAGCGAGTTCATCACAGAAGCG 60233 |||| || || | || ||| || | ||||| ||||| | || ||| Sbjct 116584 GAGTCAAGGCTATCGTCCGCAACGC-GGTGGAGATCGAGAGGGAGTTTGTGTGCGACGCG 116642 Query 60234 CTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTC 60293 || || || | | || ||| ||| | |||| |||||||| |||| ||| Sbjct 116643 CTGCCGTGTGCGTTGGTCGGGATGAACGGCGCGTTGATGAGCCAGTACATCGAGTTCGTC 116702 Query 60294 GCGGACCGCCTCATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTC 60353 || ||||| ||| ||| | |||| || | ||||| || | ||||| || Sbjct 116703 GCCGACCGGCTCTTGGGTGCGCTTGGGTGCGGGAAGGTGTACGGTGTTCAAAACCCGTTT 116762 Query 60354 GACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGG 60413 || ||||||||| ||||||||| | ||||||||||||||||| |||||| |||| || Sbjct 116763 GATTGGATGGAGCTGATCTCGTTGCAGGGGAAGACCAACTTCTTCGAGAAGAGGGTGGGT 116822 Query 60414 GATTA 60418 || || Sbjct 116823 GAGTA 116827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548310182815440