Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq8682 111 1e-19 seq6563 104 2e-17 seq9707 100 2e-16 seq3222 82.4 5e-11 >seq8682 Length=358022 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| |||||||| || || || ||||| | || ||||| | | Sbjct 100853 ATGCAGATTTTTGTTAAGACCCTCACTGGCAAGACCATCACATTGGAGGTTGAAAGCTCA 100794 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | || ||||| || || | || |||||||| Sbjct 100793 GACACCATTGACAATGTCAAGGCCAAGA-TTCAAGACAAGGAGGGCATTCCCCCAGATCA 100735 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||||||||| || ||||| | || || | | ||| ||||| Sbjct 100734 GCAGAGGTTGATCTTTGCCGGCAAACAGCTCGAAGATGGGCGTACCCTGGCCGACTACAA 100675 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 ||| || || ||||| || | || || ||||| Sbjct 100674 CATCCAGAAGGAGTCGACCCTTCACTTGGTTTT 100642 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| |||||||| |||||||| ||||| | || ||||| | Sbjct 101082 AATGCAAATCTTTGTTAAGACCCTCACCGGAAAAACCATCACCTTGGAGGTTGAAAGTTC 101023 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | ||| | || | || ||||| || || | || ||||| | Sbjct 101022 CGACACCATTGATAATGTGAAAGCCAAGA-TTCAGGACAAGGAGGGAATTCCCCCAGACC 100964 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || |||||||||||||| || || || | ||| || | | ||| |||| Sbjct 100963 AGCAGAGGTTGATCTTTGCCGGCAAACAGCTCGAGGATGGACGTACCCTGGCCGACTACA 100904 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 |||| || || ||||| || | || || ||||| Sbjct 100903 ACATCCAGAAGGAGTCAACCCTCCACTTGGTTTT 100870 Score = 102 bits (112), Expect = 6e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| ||||| || || || ||||| ||||| || || | | Sbjct 101537 ATGCAGATCTTTGTGAAAACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 101478 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | || | || ||||| || ||| | || || || || Sbjct 101477 GACACCATCGATAATGTCAAAGCTAAGA-TTCAAGACAAGGAGGGTATCCCACCGGACCA 101419 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || |||||||| || || || |||| || || | | ||||||||| Sbjct 101418 GCAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTTGCCGATTACAA 101359 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| |||||||| | ||||| || Sbjct 101358 CATTCAAAAGGAGTCCACCCTCCATTTGGT 101329 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || ||||| || || || || ||||| | | Sbjct 101309 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAAACCATTACCCTTGAGGTTGAGAGCTCT 101250 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | |||| || ||| || || || || | || ||||| || Sbjct 101249 GACACCATTGATAACGTAAAGGCCAAGATTCAAGATAAGGAGGGCATCCCCCCAGACCAG 101190 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || |||||||| || ||||||| || || | | |||||||||| Sbjct 101189 CAGAGGCTGATCTTCGCTGGCAAACAGCTTGAAGACGGTCGAACCCTTGCCGATTACAAC 101130 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || || || || || | ||||| || Sbjct 101129 ATTCAGAAGGAATCTACCCTTCATTTGGT 101101 >seq6563 Length=399665 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||||||||| ||||| || || || || ||||| |||||||| || | | Sbjct 389451 AATGCAGATTTTCGTTAAGACCCTTACAGGGAAGACCATCACCCTCGAAGTGGAGAGCTC 389392 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| |||| ||| | || |||| | || ||||| || || | || ||||||| Sbjct 389391 GGACACAATTGATAATGTGAAGGCAAAGA-TTCAAGACAAGGAGGGCATTCCCCCAGATC 389333 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || || ||||| || ||||| ||||| | | || | | ||||||| Sbjct 389332 AGCAGAGGCTGATTTTCGCCGGGAAGCAACTCGAAGATGGTAGGACCCTCGCAGATTACA 389273 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || || || || Sbjct 389272 ACATCCAGAAGGAATCAAC 389254 Score = 104 bits (114), Expect = 2e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 23597 ATTAATTACTTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTC 23655 ||| |||| | | | ||||| || ||||| ||||||||||| ||||| || ||||||||| Sbjct 390605 ATTCATTATTGATAGATGCAAATCTTCGTGAAAACCCTCACCGGAAAGACCATCACTCTC 390546 Query 23656 GAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGT 23715 || || || | | ||||| |||| | | ||| ||||| ||||| || || Sbjct 390545 GAGGTCGAGAGCTCAGACACCATTGACAACGTCAAAGCTAAAATCCAGGACAAGGAGGGA 390486 Query 23716 GTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT 23775 | || || |||||||| | || || || || || || || || || |||| || ||| Sbjct 390485 ATCCCCCCGGATCAACAAAGGTTGATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGTACT 390426 Query 23776 TTAGGCGATTACAACATACAAAAAGAGTCCAC 23807 | | || |||||||| ||||||||||| || Sbjct 390425 CTTGCTGACTACAACATCCAAAAAGAGTCTAC 390394 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || || ||| | || || || || |||||| | || || || | | Sbjct 389223 AATGCAGATCTTTGTCAAGACCTTGACTGGGAAGACCATCACTTTGGAGGTCGAGAGCTC 389164 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||||| |||| ||| | || | || | || ||||| || || | ||||| || | Sbjct 389163 GGACACTATTGATAATGTCAAGGCGAAGA-TTCAGGACAAGGAGGGCATCCCGCCTGACC 389105 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || || || ||||| || | | | ||||| | ||||||| Sbjct 389104 AGCAGAGGCTGATCTTTGCAGGGAAGCAGCTGGACGATGGAAGGACTTTGGCTGATTACA 389045 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || |||||||| Sbjct 389044 ACATTCAGAAGGAGTCCAC 389026 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| ||||| |||||||| || ||||| || ||||| || | | Sbjct 389906 ATGCAGATTTTTGTTAAGACCCTTACGGGAAAGACCATCACCCTGGAAGTCGAAAGCTCT 389847 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | |||| || ||| || || || || | || ||||| || Sbjct 389846 GACACGATTGACAATGTAAAGGCCAAGATTCAGGATAAGGAGGGCATCCCACCAGACCAG 389787 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || || || || || | | | || | | || |||||| Sbjct 389786 CAGAGGCTCATCTTTGCGGGGAAGCAGCTTGAGGATGGAAGGACCCTTGCTGACTACAAC 389727 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| |||||||| Sbjct 389726 ATTCAAAAGGAGTCCAC 389710 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || || ||||| || || || || ||||| || ||||| || | | Sbjct 389679 AATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAAGTGGAGAGCTC 389620 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | || |||| | || ||||| || || | || ||||| | Sbjct 389619 AGACACGATTGATAATGTGAAGGCAAAGA-TTCAAGACAAGGAGGGCATCCCACCAGACC 389561 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || || || || || || || || || | | || | | ||||||| Sbjct 389560 AGCAGAGGCTGATTTTCGCAGGGAAGCAGCTTGAGGATGGTAGGACCCTTGCTGATTACA 389501 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| ||||| |||||||| Sbjct 389500 ACATTCAAAAGGAGTCCAC 389482 >seq9707 Length=1014798 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||| || || || || ||||||||||| || || | Sbjct 725256 AATATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGC 725315 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | ||||| || Sbjct 725316 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 725375 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || || ||||| ||||| || ||||||| || || | | ||| ||| Sbjct 725376 CAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTCGCCGACTAC 725435 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||||| || || |||||||| | ||| | ||| Sbjct 725436 AACATCCAGAAGGAGTCCACTCTCCATCTGGTT 725468 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| ||||| || || || || || ||||||||||| || || | Sbjct 739273 AATATGCAGATCTTCGTGAAAACACTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGC 739332 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| ||||| | ||||| || Sbjct 739333 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCGGAC 739392 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || || ||||| ||||| || ||||||| || || | | ||| || Sbjct 739393 CAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTCGCCGACTAT 739452 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || |||||||| Sbjct 739453 AACATCCAGAAGGAGTCCAC 739472 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| || || || || || || ||||| || | | Sbjct 739504 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACTATAACCCTAGAAGTCGAGAGCTCC 739563 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| || || || || ||||| | ||||| ||||| Sbjct 739564 GACACGATCGACAACGTCAAAGCCAAGATCCAGGATAAGGAAGGAATTCCGCCGGATCAG 739623 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || |||||||| || |||| |||| || || ||| ||||||||| Sbjct 739624 CAGAGGCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACCCTAGCCGATTACAAT 739683 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 739684 ATCCAGAAGGAGTCAAC 739700 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||||||||| || || |||||||| ||||| || || | || Sbjct 740188 ATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGAGCTCG 740247 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || |||| | || || ||||| || || | || || || || Sbjct 740248 GACACGATCGACAACGTTAAGGC-CAAGATCCAGGACAAGGAGGGGATTCCTCCGGACCA 740306 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || ||||| || || || || |||| ||||| | | ||| ||||| Sbjct 740307 GCAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCCTCGCCGACTACAA 740366 Query 23790 CATACAAAAAGAG 23802 || || || ||| Sbjct 740367 TATCCAGAAGGAG 740379 >seq3222 Length=516221 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 || || ||||| | ||||| ||||| ||| | || || ||||| || || ||| ||||| Sbjct 55326 GATAAGGAAGGAATCCCGCCTGATCAGCAGAGATTGATTTTTGCTGGGAAGCAATTGGAA 55267 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | | ||| | | ||||||||||| ||||| ||||| ||| | ||| | ||||| Sbjct 55266 GATGGGAGGACTCTTGCTGATTACAACATCCAAAAGGAGTCAACACTTCATCTGGTTTTG 55207 Query 23824 AGGTTGCGAGGAGGA 23838 ||| | || || ||| Sbjct 55206 AGGCTTCGGGGTGGA 55192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337880655780908