Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4704 122 1e-22 seq7563 87.8 3e-12 >seq4704 Length=219207 Score = 122 bits (134), Expect = 1e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || |||||||| | ||| | || |||| ||| |||| | | |||||||| ||| || Sbjct 5924 CCCCCCTGATCAACATAACGAGCGGTGTCATTGAAAACCCGTAGCATTGGAACAATTCCA 5865 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 |||||||| ||||||||||| ||||||||| || ||||||||||| || || Sbjct 5864 TTAGATGTCCCATTTGTTCCCCGAATATAACTCCCTGTGGCACGAATATTGTGAACCGAG 5805 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || ||| ||| | |||||| ||||| |||||||| ||| Sbjct 5804 ACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAGGTGTCATATATG 5745 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 || || || |||||||| ||||| | || || |||||| Sbjct 5744 CCTTCAATGCTATCATCTTTCATGCACAACAGGAAGCAGCTA 5703 >seq7563 Length=315289 Score = 87.8 bits (96), Expect = 3e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || |||||||| || || ||||||||||||||| ||| | ||||| || ||||| | Sbjct 209455 CAAGCAAAATCGCAGTGGAGGCCTTCATCTCTAGAAATAAGCTCGTTTGAGAATGTCAAG 209514 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGC 46727 |||||||| | ||| | |||||||||||| ||||| || Sbjct 209515 CCAGGCATCAATCCCCTCTTTTTGAGCCAGAATATTGC 209552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712655455504320