Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq34 89.7 4e-13 seq14 89.7 4e-13 >seq34 Length=5171523 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || || |||| ||| |||| ||||||||||| || | Sbjct 2873818 ACATGAGCAATCATGCACGTCAATAGAGCATAAGATGCAACATTAAATGGCACACCAAGA 2873759 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| ||||| || | ||||||| ||||||||| |||| |||| |||||||| Sbjct 2873758 CCCATGTCAGCAGAACGCTGATACATTTGACAGGATAGCTCCCCATTGGCTACATAAAAC 2873699 Query 101876 TG 101877 || Sbjct 2873698 TG 2873697 >seq14 Length=8593181 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| |||| |||| ||| ||||||||||||||||| || | Sbjct 3095344 ACATGAGCAATCATGCATGTTAGGAGAGCATAAGATGCAATGTTAAATGGCACACCAAGA 3095285 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| ||||| || | ||||||| |||||| || | || |||| |||||||| Sbjct 3095284 CCCATGTCAGCAGAGCGCTGATACATTTGACAAGATAACTCCCCATTGACCACATAAAAC 3095225 Query 101876 TG 101877 || Sbjct 3095224 TG 3095223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361235336895353