Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq143 131 2e-25 seq97 114 1e-20 seq50 114 1e-20 seq17 114 1e-20 seq37 107 2e-18 seq30 107 2e-18 seq65 100 3e-16 seq31 100 3e-16 seq6 100 3e-16 seq22 96.9 4e-15 seq8 96.9 4e-15 seq66 95.1 1e-14 seq1 86.0 7e-12 seq35 84.2 3e-11 >seq143 Length=1536321 Score = 131 bits (144), Expect = 2e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || ||||||||||| |||||||| ||| | || || |||||||| |||||||| Sbjct 384170 TCCTTCTGGATATTGTAATCGGCCAGAGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAG 384229 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||||| |||||| |||| | Sbjct 384230 ATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTA 384289 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | |||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 384290 TCAATCGTGTCCGAGCTC---TCCACCTCCAGAGTGATGGTCTTCCCTGTCAGGGTCTTC 384346 Query 43170 ACAAAGATTTGCAT 43183 || || |||||||| Sbjct 384347 ACGAAAATTTGCAT 384360 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||| | ||| | || | ||| |||||| || || |||||||| || Sbjct 384818 CCTCCCCTCAGACGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCA 384877 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| |||| || || ||||| || ||||| ||||| ||||||||||| | || Sbjct 384878 AGGGTCCTGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 384937 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || |||| ||| | | | |||||| ||| || Sbjct 384938 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTTTCGAC 384996 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| |||||||| || || || | ||||| || ||||| ||||| Sbjct 384997 CTCGAGGGTGATGGTCTTACCGGTCAAGGTCTTGACGAAGATCTGCAT 385044 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || | ||||| || || || |||| |||| || || ||||| || ||||| Sbjct 385081 CTCCTTCTGGACGTTGTAGTCGGCAAGGGTCCTGCCGTCCTCGAGTTGCTTGCCGGCGAA 385140 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 385141 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 385200 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||| || |||| |||||||| || || || || ||||| || Sbjct 385201 ATCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGAC 385260 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 385261 GAAGATCTGCAT 385272 >seq97 Length=2389559 Score = 114 bits (126), Expect = 1e-20 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| |||||| || |||||| ||||| || || ||||||| |||| | || ||| Sbjct 873520 ACCAGATGCAAAGTAGACTCCTTCTGAATGTTATAGTCAGCCAAGGTCCTGCCATCCTCT 873579 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| ||||| || || || | ||||||||| | || | | |||||||||| | Sbjct 873580 AGCTGCTTTCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 873639 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || ||| ||||| | | | ||| || |||| || || || | || ||||| Sbjct 873640 ATCTTTGCTTTGACATTATCAATCGTATCTGAGCTC---TCAACCTCAAGGGTTATGGTC 873696 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || |||||||||||||| ||||||||| Sbjct 873697 TTTCCAGTAAGCGTCTTTACAAAAATTTGCATT 873729 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || |||||||| ||||||||||||| |||||| | || || || ||||| ||||| || Sbjct 873766 TCTTTTTGAATGTTGTAATCAGCCAAAGTCCGGCCATCTTCAAGTTGCTTTCCAGCAAAG 873825 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | || |||||||| | || | | ||||||||| |||||| ||||| | Sbjct 873826 ATCAATCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATTTTGGCTTTGACATTA 873885 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | || || ||| ||||| |||| || || || || || || || ||||| Sbjct 873886 TCAATTGTATCAGAACTC---TCCACTTCGAGAGTTATAGTCTTTCCTGTGAGGGTCTTG 873942 Query 43170 ACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 873943 ACAAAGATTTGCAT 873956 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||| || || || | || || |||||||| || ||||| Sbjct 873310 TCCTTCTGTATGTTGTAATCAGCAAGGGTACGGCCATCCTCAAGCTGCTTCCCGGCGAAG 873369 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | ||||||||| | || | | ||||||||| | || ||| || | ||| Sbjct 873370 ATGAGCCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTAGTATCTTTGCCTTCA-CGTT 873428 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || || | ||||| ||||| || || || ||||| Sbjct 873429 GTCAATTGTGTCTGAGCTC---TCAACCTCTAGAGTGATTGTTTTCCCAGTGAGGGTCTT 873485 Query 43169 TACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 873486 CACAAAGATCTGCAT 873500 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||||||||||||| ||||| || || |||||||| ||| Sbjct 873046 CCACCACGTAGACGAAGCACCAAATGCAATGTAGATTCCTTCTGTATGTTGTAATCGGCC 873105 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| || | || || | |||||| ||||| || ||||| | |||||| || | || Sbjct 873106 AAAGTGCGTCCATCTTCCAACTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGTGGA 873165 Query 43077 ACGCTCTCCTTGTC 43090 | | ||||||||| Sbjct 873166 ATACCCTCCTTGTC 873179 >seq50 Length=4141196 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| || || || |||| ||||||||||| || || || Sbjct 1514053 TCCTTCTGGATGTTGTAGTCAGCGAGTGTTCGGCCGTCCTCTAGCTGCTTGCCGGCAAAG 1514112 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | |||||||||| ||| || ||||| ||| Sbjct 1514113 ATCAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTAGCTTTGA-CGTT 1514171 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || |||| |||||||| ||||| || || ||||| || Sbjct 1514172 GTCGATAGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 1514231 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 1514232 GAAGATTTGCAT 1514243 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| || || || ||| | || || ||||||||||||||||| Sbjct 1513141 TCCTTCTGGATGTTGTAATCGGCGAGGGTGCGCCCATCCTCAAGCTGCTTACCAGCGAAG 1513200 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 1513201 ATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTT 1513259 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||| || |||| ||||| || | |||||||| || ||||| | ||||| Sbjct 1513260 GTCAATCGTATCCGAGCTC---TCCACCTCCAGTGTGATGGTCTTCCCCGTCAATGTCTT 1513316 Query 43169 TACAAAGATTTGCATT 43184 || |||||||||||| Sbjct 1513317 CACGAAGATTTGCATT 1513332 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| |||| ||| | ||| | || | ||| |||||||| || ||||| || || Sbjct 1513789 CCTCCCCTTAGACGGAGCACAAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCA 1513848 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | |||| || || ||||| || ||||| || | ||||||||||| | || Sbjct 1513849 AGGGTTCTACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGAGGA 1513908 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||||||| ||| || |||| ||| | | | ||||| |||| || Sbjct 1513909 ATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TC 1513964 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| ||||| || | ||||| ||||| || ||||| Sbjct 1513965 GACCTCAAGGGTGATGGTCTTGCCGGTCAATGTCTTGACAAAAATCTGCAT 1514015 >seq17 Length=7869039 Score = 114 bits (126), Expect = 1e-20 Identities = 156/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| |||||| || |||||| || || ||||||||||||| ||| || | || || Sbjct 3557871 ACCAGATGCAAGGTAGACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGACCATCCTCG 3557930 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || || | |||||||| | || | || |||||| ||| || Sbjct 3557931 AGCTGCTTTCCGGCAAAAATTAGCCTTTGCTGGTCTGGGGGAATGCCCTCCTTATCC-TG 3557989 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | |||||| |||| | | | ||| || |||| || || || | ||||| || Sbjct 3557990 AATTTTTGCCTTGACGTTATCAATCGTATCAGAGCTC---TCAACTTCAAGAGTGATTGT 3558046 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || ||||| ||||| ||||||||||||||| Sbjct 3558047 TTTTCCGGTTAGAGTCTTGACAAAGATTTGCATT 3558080 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||||||||| || || ||||| | || || |||||||| ||||| || Sbjct 3557205 TCCTTCTGAATATTGTAATCTGCAAGGGTCCGGCCATCCTCAAGCTGCTTTCCAGCAAAG 3557264 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| | ||||||||| | || | | |||||||| | ||| | |||| |||| | Sbjct 3557265 ATGAGCCTCTGCTGGTCCGGTGGAATTCCCTCCTTGT-CTTGAATCTTTGCCTTGACATT 3557323 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || || | |||||| || || || || || ||||| Sbjct 3557324 GTCAATGGTGTCTGAGCTC---TCAACTTCAAGCGTGATAGTCTTTCCAGTCAGAGTCTT 3557380 Query 43169 TACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 3557381 AACGAAGATCTGCAT 3557395 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||||||||||| ||||| | || || ||||| || |||||||| Sbjct 3558116 CTCCTTCTGGATGTTGTAATCAGCCAACGTCCGACCATCCTCGAGCTGTTTCCCAGCGAA 3558175 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | | ||||||||| |||||| || | | Sbjct 3558176 GATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATTTTAGCCTTTACATT 3558235 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 3558236 ATCAATGGTGTCAGAGCTC---TCAACTTCGAGAGTGATAGTCTTTCCAGTGAGTGTCTT 3558292 Query 43169 TACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 3558293 AACAAAGATCTGCAT 3558307 >seq37 Length=4974474 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| ||||| | |||| |||||||||| ||||| |||||| |||| || || Sbjct 2663394 TCCACCTCTCAAACGAAGAACCAGATGCAATGTGGATTCCTTCTGAATAATGTAGTCTGC 2663453 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || ||||| |||||||||||||| || |||| ||||||||| | || Sbjct 2663454 CAAGGTTCGACCATCCTCTAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAG-GGG 2663512 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | || || || |||||| |||| | | | ||||| ||| ||| Sbjct 2663513 GATTCCTTCTTTATCTTGGATTTTGGCCTTGACATTGTCAATAGTGTCAGAGCT---TTC 2663569 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || || || || ||||| |||||||| ||||| Sbjct 2663570 AACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 2663620 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| || || |||||||||||||||||||| || | | || ||| Sbjct 2662731 ACCAAGTGGAGGGTGGATTCTTTCTGAATATTGTAATCAGCCAGTGTTCTTCCATCTTCT 2662790 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| ||||| || ||||| ||||||||||| | || | | |||||| ||| | Sbjct 2662791 AGCTGCTTCCCAGCAAAGATGAGCCGCTGCTGGTCAGAAGGAATTCCCTCCTTATCCTGG 2662850 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || ||| ||| | | | | || || ||| ||||| || | || |||||| Sbjct 2662851 ATCTTTGCTTTTACATTGTCTATAGTATCAGAACTC---TCCACTTCTAAAGTAATGGTT 2662907 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || || ||||| || || || Sbjct 2662908 TTCCCAGTCAGTGTTTTGACAAAAATCTGAAT 2662939 Score = 91.5 bits (100), Expect = 2e-13 Identities = 141/196 (72%), Gaps = 9/196 (5%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||| |||| || || | || |||| || || ||||| || Sbjct 2662976 CTCCTTCTGAATGTTGTAATCTGCCAAGGTACGGCCATCCTCTAATTGTTTTCCAGCAAA 2663035 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 |||||| | ||| ||||| | || | | ||||||||| ||| | || | | | | | Sbjct 2663036 TATGAGCCTCTGTTGGTCAGGTGGGATGGCTTCCTTGTCC-TGAATCTTAGCCTTAACAT 2663094 Query 43112 CGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| ||| || || | |||||| ||||| |||| ||||||| Sbjct 2663095 TGTCTATGGTGTCTGAGCT---TTCTACTTCAAGCGTGATAGTTTT-CCCGGAAGCGTCT 2663150 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||||||||| Sbjct 2663151 TAACAAAGATTTGCAT 2663166 >seq30 Length=5940761 Score = 107 bits (118), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| |||||||||| |||||||| || ||||| ||||||| || || | Sbjct 3345713 ACGGAGCACCAGATGCAATGTGGATTCCTTTTGTATGTTGTAGTCAGCCAAGGTGCGACC 3345772 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| ||||| || | ||||||||| | || | | ||| || Sbjct 3345773 ATCCTCCAGCTGCTTCCCAGCAAATATCAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTT 3345832 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| | |||| | ||| | || | | || |||| || || || | | Sbjct 3345833 GTCC-TGAATCTTTGCCTTCACGTTGTCAATGGTATCTGAGCTC---TCAACCTCTAGAG 3345888 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||||| || || || ||||| ||||| || ||||| Sbjct 3345889 TGATGGTTTTCCCGGTCAGGGTCTTCACAAAAATCTGCAT 3345928 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || || |||||||| | || || |||||||| ||||| || Sbjct 3345965 CTCCTTCTGAATGTTGTAGTCTGCAAGAGTCCGTCCATCCTCCAGCTGCTTTCCAGCAAA 3346024 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 || || | |||||||| | || | || |||||||||| ||| | || | |||| Sbjct 3346025 AATAAGCCTTTGCTGGTCTGGTGGAATGCCCTCCTTGTCC-TGAATCTTAGCCTTGACAT 3346083 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || |||| ||||||||||| || || || |||| Sbjct 3346084 TGTCAATTGTGTCCGAGCTC---TCAACTTCGAGTGTGATGGTTTTCCCTGTGAGGGTCT 3346140 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 3346141 TAACAAAAATCTGCAT 3346156 Score = 84.2 bits (92), Expect = 3e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || ||||| | || | || | || |||||| || ||||||||||| || Sbjct 3346613 TCCTCCCCTCAAACGAAGAACAAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCGGC 3346672 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | || || |||||||| ||||| || || | | ||||||||| | || Sbjct 3346673 CAATGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGG 3346732 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| ||| || | | | | || || |||| || Sbjct 3346733 GATTCCCTCCTTGTCTTGGATCTTTGCCTTAACATTATCAATGGTATCAGAGCTC---TC 3346789 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| |||||||| || || || || ||||| || ||||||||||| Sbjct 3346790 GACCTCGAGAGTGATGGTCTTTCCTGTGAGGGTCTTAACGAAGATTTGCAT 3346840 >seq65 Length=3230173 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || || || || | |||| ||| | ||| |||||| || || |||||||| || Sbjct 2676799 TCCACCCCTCAATCGAAGAACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGC 2676858 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || || ||||||||||| || || || ||||||||||| | || Sbjct 2676859 CAAGGTTCGGCCATCCTCCAGTTGCTTACCAGCAAAGATAAGCCGCTGCTGGTCAGGTGG 2676918 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| |||||| |||| | | | |||||| ||| || Sbjct 2676919 GATTCCTTCCTTGTCTTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTTTCAAC 2676978 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 2676979 CTCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCAT 2677026 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| |||||||| |||| || || | || || ||||| || ||||| || Sbjct 2676380 TCCTTCTGAATGTTGTAATCGGCCAAGGTACGACCATCCTCAAGCTGTTTTCCAGCAAAA 2676439 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | ||| ||||| | || | || |||||| ||| ||| | || | | | | | Sbjct 2676440 ATGAGCCTCTGTTGGTCAGGTGGGATGCCCTCCTTATCC-TGAATCTTAGCCTTAACATT 2676498 Query 43113 GCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | || | |||| ||| || || | ||||||||||| || || || ||||| || Sbjct 2676499 GTCAATGGTGTCTGAACTTTCTACTTCAAGTGTGATGGTTTTCCCAGTAAGGGTCTTGAC 2676558 Query 43172 AAAGATTTGCATT 43184 ||| || |||||| Sbjct 2676559 AAATATCTGCATT 2676571 >seq31 Length=5807843 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || || || || | |||| ||| | ||| |||||| || || |||||||| || Sbjct 4127517 TCCACCCCTCAATCGAAGAACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGC 4127458 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || ||||| ||||||||||| || || || ||||||||||| | || Sbjct 4127457 CAAGGTTCGGCCATCCTCTAGTTGCTTACCAGCAAAGATAAGCCGCTGCTGGTCAGGGGG 4127398 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | |||||||| |||||| |||| | | | |||||| ||| || Sbjct 4127397 GGTTCCTTCCTTGTCTTGGATTTTGGCCTTGACATTATCAATAGTGTCGGAGTTTTCAAC 4127338 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 4127337 CTCAAGGGTGATGGTCTTGCCTGTAAGAGTCTTAACAAAGATCTGCAT 4127290 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60056 GAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||||| ||| | || || ||| ||||||||| |||| |||||||||||||||| ||| Sbjct 2514522 GAAAACTTTACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATA 2514581 Query 60116 CTCACCACTATACTAC 60131 |||||||||||||||| Sbjct 2514582 CTCACCACTATACTAC 2514597 >seq6 Length=10738081 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| | |||| ||| | || || || || ||||||||||| || Sbjct 270637 TCCTCCTCTGAGACGAAGAACCAGATGAAGCGTCGATTCTTTCTGGATATTGTAATCGGC 270696 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||| || || |||| || |||||||| || ||||| || || || ||||| |||| || Sbjct 270697 CAGGGTTCGGCCGTCCTCAAGCTGCTTTCCCGCGAAGATAAGGCGTTGCTGATCGGGAGG 270756 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || ||| |||||| ||| || || | | | | ||||| || || || Sbjct 270757 GATGCCCTCTTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAGGACTCAAC 270816 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| || ||||| || ||||| ||||| ||||| Sbjct 270817 CTCTAGGGTTATGGTTTTCCCAGTTAGGGTTTTTACGAAGATCTGCAT 270864 >seq22 Length=7127660 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || || || || | |||| ||| | ||| |||||| || || |||||||| || Sbjct 3801405 TCCACCCCTCAATCGAAGAACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGC 3801346 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || ||||| || |||||||| || || || ||||||||||| | || Sbjct 3801345 CAAGGTTCGGCCATCCTCTAGTTGTTTACCAGCAAAGATAAGCCGCTGCTGGTCAGGGGG 3801286 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| |||||| |||| | | | |||||| ||| || Sbjct 3801285 GATTCCTTCCTTGTCTTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTTTCAAC 3801226 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || || ||||| ||||| || ||||| Sbjct 3801225 CTCAAGGGTGATGGTCTTGCCTGTAAGAGTCTTAACAAAAATCTGCAT 3801178 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| ||||||||||||| || || | || || ||||| || ||||| || Sbjct 3801770 TCCTTCTGAATGTTGTAATCAGCCAAGGTACGACCATCCTCAAGCTGTTTTCCAGCAAAA 3801711 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | ||| ||||| | || | || |||||| ||| ||| | || | | | | | Sbjct 3801710 ATGAGCCTCTGTTGGTCAGGTGGGATGCCCTCCTTATCC-TGAATCTTAGCCTTAACATT 3801652 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| ||| ||| || || | ||||||||||| || || || ||||| Sbjct 3801651 GTCAATGGTGTCCGAGCT---TTCTACTTCAAGTGTGATGGTTTTCCCAGTAAGGGTCTT 3801595 Query 43169 TACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 3801594 AACAAATATCTGCAT 3801580 >seq8 Length=10307871 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | || | ||||| || | || ||||| || |||||||||||||| Sbjct 8849565 TCCTCCTCTGAGTCGGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATATTGTAATCAGC 8849506 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || |||||||| || ||||| || || || ||||| |||| || Sbjct 8849505 TAGGGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAGATAAGGCGTTGCTGATCGGGAGG 8849446 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || ||| ||||| ||| || || | | | | ||||| ||||| || Sbjct 8849445 TATGCCCTCTTTGTCTTGGATCTTCGTCTTCACATTGTCGATGGTGTCTGAGGATTCAAC 8849386 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 8849385 CTCAAGGGTTATGGTCTTCCCGGTTAGGGTTTTTACGAAGATCTGCAT 8849338 >seq66 Length=3234583 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | || | |||| || | |||| ||||||||| || ||||| || || Sbjct 1444492 TCCTCCTCTGAGGCGGAGAACCAGGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGC 1444551 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | | || || ||||| || ||||| || ||||| ||||| ||||||| || Sbjct 1444552 TAGTGTTCTTCCATCTTCGAGCTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCGGGAGG 1444611 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| | || | || | | | | ||||| |||||| | Sbjct 1444612 AATCCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTATCGATAGTGTCCGACGATTCAA 1444670 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCGA 43194 | || | || || || || || ||||| || || || ||||||||||| || |||||| Sbjct 1444671 CCTCTAGGGTTATCGTCTTCCCTGTTAGGGTTTTCACGAAGATTTGCATCTT--CGCCGA 1444728 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | || | |||| || | |||| |||||| || || ||||| || || Sbjct 1475987 TCCTCCTCTGAGGCGGAGAACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGC 1476046 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | | || || ||||| || ||||| || ||||| ||||| ||||| | || Sbjct 1476047 TAGTGTTCTTCCATCTTCGAGCTGTTTTCCAGCAAAAATGAGGCGCTGTTGGTCAGGAGG 1476106 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| | || | || | | | | ||||| |||||| | Sbjct 1476107 AATCCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTATCGATAGTGTCCGACGATTCAA 1476165 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | || || || || || ||||| || || || ||||||||||| Sbjct 1476166 CCTCTAGGGTTATCGTCTTCCCTGTTAGGGTTTTCACGAAGATTTGCAT 1476214 >seq1 Length=14325340 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 60054 ATGAAAAATTT-TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 |||||||||| || || || ||| ||||||||| |||| |||||||||||||||| Sbjct 6203107 ATGAAAAATTAATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGA 6203166 Query 60113 ATACTCACCACTATACTAC 60131 ||||||||||||||||||| Sbjct 6203167 ATACTCACCACTATACTAC 6203185 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| | | || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 8604726 AAAAATATACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 8604667 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 8604666 TCACCACTATACTAC 8604652 >seq35 Length=5153409 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131 |||||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||| Sbjct 4165492 GCAGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTAC 4165550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571791846764840