Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-14 >seq1 Length=14325340 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| || ||||| || | |||| || || || ||||| || || || |||||| Sbjct 9211663 GTTCCGCCCCTAAGCCTCAGGACCAGGTGCAAGGTCGATTCCTTTTGGATGTTGTAATCT 9211722 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | |||||| | || ||| || |||||||| ||||||||||| | |||||| ||||| || Sbjct 9211723 GCAAGAGTACGGCCATCTTCCAATTGTTTACCAGCAAAAATTAGTCTTTGTTGATCAGGG 9211782 Query 146168 GGAATTCCTTCTTTATCTTG 146187 ||||| || || || || || Sbjct 9211783 GGAATGCCCTCCTTGTCCTG 9211802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743492913429760