Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq257 87.8 4e-12 >seq257 Length=623575 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 248805 CAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAA 248864 || ||| || || || |||||||| | ||| ||||| || |||| ||| || || | || Sbjct 424396 CAGAGACTTTGACTATGATTTCTTCGGTTTTAAAACCCTTGAGAGATCCTACCTGTTGAA 424455 Query 248865 AATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGAT 248924 || | || ||| | || ||| | ||||||||||||||| | || ||||| || || Sbjct 424456 GGTTCAGGGGAAGGTTGTAGAAAGGCCACAGCACATGTTGATGAGGGTTGCTGTTGGAAT 424515 Query 248925 TCACAAGGATGACATAGA 248942 |||||||||||||| || Sbjct 424516 CCACAAGGATGACATTGA 424533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073716831251904