Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq97 84.2 2e-11 >seq97 Length=2389559 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| || || |||| || | ||| ||||| ||||| Sbjct 873766 TCTTTTTGAATGTTGTAATCAGCCAAAGTCCGGCCATCTTCAAGTTGCTTTCCAGCAAAG 873825 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 ||||| | ||||||||| | || | || || || ||| ||||| |||||| || Sbjct 873826 ATCAATCTTTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATTTTGGCTTTGACATTA 873885 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||||| | |||||| |||| || || || || || || | ||||| ||| Sbjct 873886 TCAATTGTATCAGAACTCTCCACTTCGAGAGTTATAGTCTTTCCTGTGAGGGTCTTGACA 873945 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 873946 AAGATTTGCAT 873956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354762021161244