Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq97 104 2e-17 >seq97 Length=2389559 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||||||||| | ||||||||| || ||||||||||||||| ||| ||| |||||| Sbjct 873063 CACCAAATGCAATGTAGATTCCTTCTGTATGTTGTAATCGGCCAAAGTGCGTCCATCTTC 873122 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 ||| || || || ||| |||| |||||||| ||||| || | || || ||||| Sbjct 873123 CAACTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGTGGAATACCCTCCTTGTCTTG 873182 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGT-TCCGTTTCCACGGTAATGGTTT 20177 ||| ||| ||||| | ||| | ||| || | || |||| ||||| || | Sbjct 873183 AATCTTTGCCTTCACATTATCAATGGTATC-TGAGCTCTCTACCTCCAGAGTAATTGTCT 873241 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | || ||||| || ||||||||||| ||||| Sbjct 873242 TCCCCGTCAAGGTCTTGACAAAAATCTGCAT 873272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419568775270443