Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 7e-12 >seq6 Length=10738081 Score = 86.0 bits (94), Expect = 7e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || || ||||| || ||||| || || || || ||| || || || ||||||||||| Sbjct 5633820 CAAGCGAAATCGCAGTGCAACCCCTCGTCTCTTGATATCAACTCGTTTGAAAATGTTAAC 5633761 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAA 21594 || ||||| || || | || || ||||| ||||| | |||||| ||| || || ||||| Sbjct 5633760 CCCGGCATCAACCCGCGTTTCTTCAACCAGAATATCG-CGCAAAAGCTGCCAGAGAAGAA 5633702 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 || ||||| ||| || || || |||| ||||| Sbjct 5633701 TATCCCCTCGACGCAGGCGAAGGCGACTAGACGTTC 5633666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531876844517720