Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq172 105 8e-18 >seq172 Length=1237761 Score = 105 bits (116), Expect = 8e-18 Identities = 191/277 (69%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCG-TTGGAGG 11650 ||| || ||||| || || |||||||||||||| ||||| || | ||||||| || | Sbjct 424954 GAACCCATCCATCTCCGTCAGAAGCTGGTTGATTGTCTGCTCCCTCTCATCGTTTCCACC 424895 Query 11651 GCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATAC 11710 | | | || ||| ||||| | |||| || || ||||| ||||| || ||||| || | Sbjct 424894 TCCGAGC-CCAGCCCCACGCTGCCTACCCACGGCATCAATTTCATCAATAAATACAATGC 424836 Query 11711 ACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTA 11770 | || |||| ||||| |||||| | || || || | | |||||||| |||| Sbjct 424835 AGGGGGCCTTGGACTTTGCCTTTTCGAACAAGTCCCGAACCCTCGATGCTCCAACTCCTA 424776 Query 11771 CGAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAG 11830 |||||| ||| || || | | |||| |||| | || || || || || |||| Sbjct 424775 CGAACAACTCCACAAACTCCGACGCAGCACACGAGAAAAACGGCACTCCAGCTTCTCCAG 424716 Query 11831 CGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGG 11867 | | ||| || || | || ||||| || || ||||| Sbjct 424715 CAACGGCACGGGCCAAAAGGGTCTTTCCAGTTCCAGG 424679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588949473993400