Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3603 612 3e-170 seq370 190 3e-43 seq74 163 4e-35 seq120 134 2e-26 seq199 132 6e-26 seq162 127 3e-24 seq9 127 3e-24 seq49 109 7e-19 seq197 104 3e-17 seq169 100 4e-16 >seq3603 Length=163330 Score = 612 bits (678), Expect = 3e-170 Identities = 733/993 (74%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| || || | || || || || || || | ||| || || || || | Sbjct 455 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 514 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| ||||||||||| || || ||||||||||| | |||||||| || ||| Sbjct 515 CCAAGGTTAGCACGGTTGATAATATCAGCCCAAGTGTTAATTACACGACCTTGACTGTCA 574 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | ||||| || ||||| |||||||| || || ||||||||||| ||| | ||| | Sbjct 575 ACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTGATACCTAAA 634 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 || || |||||||| || || || ||||| ||||| |||||||| || || ||||| || Sbjct 635 GCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 694 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| |||||||||||||||||| || || || || ||||| || || ||||| Sbjct 695 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATA 754 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 || || || ||||| ||||||||||| | ||||| | || || ||| ||||||| Sbjct 755 TTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCAGTG 814 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || || | || | ||| || |||| || ||||||||| ||| || || || Sbjct 815 GTTTCCCTGATTAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 874 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 |||||||| ||||| ||||| | |||||| || |||||||||||||| ||||| || ||| Sbjct 875 CCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 934 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||||| |||| |||| |||||||||||||| || ||||||||| |||| ||||| Sbjct 935 TGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAGAAG 994 Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324 |||||||| | || |||| | ||| || ||| | ||||| || || ||||| ||| Sbjct 995 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 1054 Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384 ||||| ||| ||||| ||||||||||| | ||| | |||||||| ||||| ||| Sbjct 1055 TATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCATTCACGACCC 1114 Query 27385 ATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTA 27444 || ||| | | || | | |||||| | || | |||| |||||||||| || Sbjct 1115 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTG 1174 Query 27445 TACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCA 27504 || ||||| ||||| | ||||| ||||||||||| || || ||||| | |||||| || Sbjct 1175 TATAACCATTCATCAACGGATGCCGCTTCCCAGATCGGATAAAAGTGCAAACCGATAGCT 1234 Query 27505 TTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCA 27564 ||| | || | || |||||||| || || ||||| ||||| | || || |||| | Sbjct 1235 GCAGAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAGAGACCCAGAA 1294 Query 27565 ACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA- 27623 || |||||||||||||| |||||||| || || || || || ||||| || | ||| || Sbjct 1295 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAAT 1354 Query 27624 GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAA 27683 |||| |||||| | || | || |||||||||| ||||||||||| |||| || | Sbjct 1355 ACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAAAG 1413 Query 27684 ACGGTTGTTAGTTGATGTCACCCACTCACAGAA 27716 |||||| | ||| || | ||| | |||||| Sbjct 1414 ACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1446 Score = 518 bits (574), Expect = 4e-142 Identities = 730/1020 (72%), Gaps = 4/1020 (0%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | ||| || | |||||| | || |||||| || || | Sbjct 38067 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 38008 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| ||||||| Sbjct 38007 GATCCTGAGCCGCCATCCAAGCACGAATCCCTTCGTTTAAGAGAATATTTTTAGTGTAGA 37948 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | || ||| | | |||||| || ||||| || || || || || ||||| |||| Sbjct 37947 AAGTTTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 37888 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || ||||| || || | | |||| || | | ||| | ||| | || || | Sbjct 37887 GTAGGTTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 37828 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||| | Sbjct 37827 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 37768 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| ||||| || | ||||| | | || | Sbjct 37767 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTCTCTTCAGCTTGAGTTGGGTTAAAAG 37708 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || |||||||| | | ||||| || || ||| | |||| Sbjct 37707 CACGGAATGTATTTGCACCGTCACCATCTTCGAATAAAGTATTTTCTACGGTAGCACCAT 37648 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || || || | |||| || || ||||||||||||||||| || |||| Sbjct 37647 GAATAGCGCATAGCAGAGCAGCACCCAATACGCCGGCAACTCCCATCATATGAAATGGGT 37588 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | |||||| |||||||| || |||| |||||| | ||| | || || || || |||| Sbjct 37587 TCAACGTCCAATTATGAAACCCTTGGAAGAAGAGGATGAATCGAAATATAGCTGCTACAC 37528 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| ||||| || | ||||| || ||||||||||| | Sbjct 37527 CAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGGATAAATCAGGAATACAGAAA 37468 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| ||| |||| || || || ||||| || || || | | || ||| Sbjct 37467 CAAAAACAGCAATTGGAGCAGAGAATGCGATTGCATTATAAGGGCGCAATTGAAC-AGAT 37409 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || ||||| || ||||||||||| |||||||| | | | || || || ||||||||| Sbjct 37408 CGAGCAAGTTCGAATTGACGTAACATGAAACCTATTAATCCGAAAGCGCCATGGAGAGCA 37349 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 37348 ACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 37289 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGT- 24223 ||||| ||||| | | |||||| | | | | |||||| || || || || || || Sbjct 37288 CCCCATAGTAGTAATAAAGAATGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCGGTT 37229 Query 24224 AAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAAC 24283 |||||| || ||| || | |||||||||||| | ||||||||| ||||| || || Sbjct 37228 AAGAAA-TTGCAACCTTCCAAATAGGAACTAGCCAATCCATGGGTATACCATGAAGTTAC 37170 Query 24284 AAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAG 24343 ||| | ||| ||||| | |||||| || | || | ||| ||| |||| || | || Sbjct 37169 AAAGGTTGTACCAGTGAACCAACCTCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAG 37110 Query 24344 TCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 || |||||||| ||||| || || || |||| | |||||| |||| || ||||| Sbjct 37109 ACCGGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 37050 >seq370 Length=242655 Score = 190 bits (210), Expect = 3e-43 Identities = 209/276 (76%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 23856 TGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATC 23915 ||||| ||||| | |||||| |||||||| || |||| |||||| | ||| | || || Sbjct 137789 TGGAATGGGTTCAACGTCCAATTATGAAACCCTTGGAAGAAGAGGATGAATCGAAATATA 137848 Query 23916 GCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGG 23975 || || ||||| ||||| ||||||||||||||| ||||| || | ||||| || ||| Sbjct 137849 GCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGGATAAATCAGG 137908 Query 23976 AATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATT 24035 |||||||| || || |||||||| ||| |||| || || | ||||| || || || | | Sbjct 137909 AATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCGAATGCATTATAAGGGCGCAAT 137968 Query 24036 CCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACC 24094 || ||| || || ||||| || ||||||||||| |||||||| | | | || | || Sbjct 137969 TGAA-CAGATCGAGCAAGTTCGAATTGACGTAACATGAAACCTATTAATCCGAAAGHGCC 138027 Query 24095 GTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTG 24130 |||||||||||||| | ||| || || || | ||| Sbjct 138028 ATGGAGAGCAACAAAAGTCCACAGGCCGCCTAATTG 138063 >seq74 Length=3028681 Score = 163 bits (180), Expect = 4e-35 Identities = 291/422 (69%), Gaps = 2/422 (0%) Strand=Plus/Minus Query 26939 CAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGGAAGATCAAACGAC 26998 ||| ||| || || || ||| | || |||||||| ||||||||||||||||| | Sbjct 694774 CAAAGAAAAA-TGTAAAGAATGAGAATTGTTGAAACTAGCATATTGGAAGATCAGTTCGC 694716 Query 26999 CGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAAC 27058 | || || ||||| | | || || || || || |||| || || ||| ||||| Sbjct 694715 CAAAATAACCATGGGTGGTTACAATATTATAAGTTTCTTTCCCTAAACTGAATCCATAAC 694656 Query 27059 CATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGGACGAGTGAAGATGTAACCAGACTTC 27118 | | || | | | |||| || || || | || | ||| || ||| | Sbjct 694655 CTTCATTAACAAAATAATTTTCGGTGGTTTCCCTGATTAAAATAGAAGTTACCGAGGAAC 694596 Query 27119 CGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAACG 27178 ||||||||| || ||||| ||| ||||| ||||| ||||| | |||||| || | Sbjct 694595 AATGCATAGCACCAAACAGAGAACCATAGAATATACCAGCTACACCTAACATGTGAAATG 694536 Query 27179 GGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGA 27238 ||||||||||||| |||| | |||| |||||||| |||| |||| ||||||| | ||| Sbjct 694535 GGTGCATAAGGATGTTGTCCTAAGCCTAGAATACAATCATGAAGTTGAAAGTACTA-AGA 694477 Query 27239 TACCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACTG 27298 | || | ||||||| |||| ||||| |||||||| | ||||||| | ||| || | Sbjct 694476 TCCCTAAAGGCATACCATCAGAGAAGCTTCCTTGACCAATTGGATAGATCAAGAAGACAG 694417 Query 27299 CACTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGATCCATGGACGCATACCTAAAC 27358 | | ||| | | || || | ||||||| ||| | ||||| ||| ||||||| | || Sbjct 694416 TAGTAGCATCTACCACAAGACCTTAATATGCAACAGAAATCCAAGGATGCATACCCAGAC 694357 Query 27359 GA 27360 || Sbjct 694356 GA 694355 >seq120 Length=1927911 Score = 134 bits (148), Expect = 2e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 23842 CAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAA 23901 |||||||||||||||| || ||||| | ||| || |||||||| || | || ||||| | Sbjct 1770837 CAACTCCCATCATATGAAATGGGTTCAACGTTCAATTATGAAACCCTTAGAATAAGAGGA 1770778 Query 23902 GGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCA 23961 ||| | || || || || ||||| ||||| ||||||||||||||| ||||| || | Sbjct 1770777 TGAATCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTA 1770718 Query 23962 AAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCAT 24021 ||||| || ||||||||| | || || ||| |||| ||| || | || ||||| || | Sbjct 1770717 GTGGATAAATCAGGAATACAAAAACAAAAACAACAATTGGAACAAAGAATGCAATTGCGT 1770658 Query 24022 TGTAGGG 24028 | || || Sbjct 1770657 TATAAGG 1770651 >seq199 Length=1013994 Score = 132 bits (146), Expect = 6e-26 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||| ||| || || || || || || || || || | ||| || || || || | Sbjct 992379 TCAACAGTAGCTAGGTCTAAAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 992438 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| ||| ||||||| || || ||||||| ||| | |||||||| || ||| Sbjct 992439 CCAAGGTTAGCRCGGTTGATAATATCAGCCCAAGAGTTAATTACACGACCTTGACTGTCA 992498 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | ||||| || ||||| | |||||| || || ||||||||||| ||| | ||| | Sbjct 992499 ACTACAGATTGGTTGAAATYGAAACCATTTAGGTTGAAAGCCATGGTGCTGATACCTAAA 992558 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGA 26963 || || |||||||| || || || ||||| ||||| |||||||| | || ||||| || Sbjct 992559 GCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAACGTAAAGAACGAGA 992617 >seq162 Length=1386390 Score = 127 bits (140), Expect = 3e-24 Identities = 185/259 (71%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| ||| | || | ||| || | ||||||||| |||||||| | ||| | Sbjct 712294 CATCCAAGGACGAATCCCTTCGTTTAAGAGAATATTTTTAGTGTAGAAAATTTCAAATTT 712235 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGC 23578 | |||||| || |||||||| || || || || ||||| ||||| || || |||| Sbjct 712234 AGGATCTTCTGCTGCACGAATTTCCTGGGAAACGAAGTCATAGGCACGTAGGTTCAGAGT 712175 Query 23579 AAGCCCAA-TGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAA 23637 || || | || | |||| || | | ||| | ||| | || | ||||| ||||||| Sbjct 712174 CAGACCGACTGCT-CCAAGAGCACTCATCCATAAACCGGTTACTGATACAAATAACATAA 712116 Query 23638 AGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGAT 23697 |||| | |||||||| |||||| ||| |||| ||| | |||||| |||||||| |||| Sbjct 712115 AGAAACGTAACCAACGTTTATTGTAAAAAGCAATCCCAAGGATTTGGGACCAAAAGCGAT 712056 Query 23698 TTGCTGTAACCATCGAATA 23716 || || ||||| ||||| Sbjct 712055 CAGCAGTGACCATTGAATA 712037 >seq9 Length=10250128 Score = 127 bits (140), Expect = 3e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 23766 TCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCT 23825 || ||||||| | | ||||| | || ||| | ||||||||||| | || || | Sbjct 5987989 TCGCCATCTTTGAATAAAGTATTTTTTACGGTAGCACCATGAATAGCGCATAGCAGAGYA 5987930 Query 23826 CCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAG 23885 | |||| || || ||||||||||||||||| || ||||| | |||||| |||||||| Sbjct 5987929 GCACCCAATACGCCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAAC 5987870 Query 23886 CCCTGGAGGAAGAGAAGGAACCTGAAA---ATCGCCGCAACACCGAAACTCGGCGCAAAG 23942 || |||| |||||| | ||| | |||| || || || ||||| ||||| || |||||| Sbjct 5987869 CCTTGGAAGAAGAGGATGAATC-GAAATATATAGCTGCTACACCAAAACTAGGTGCAAAG 5987811 Query 23943 AACCAAGATGACTGTCCCAAAGGATAGATGAGGAA 23977 |||||| ||||| || | ||||| || | ||| Sbjct 5987810 AACCAACCAGACTGACCTAGTGGATAAATCAAGAA 5987776 >seq49 Length=4165818 Score = 109 bits (120), Expect = 7e-19 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23606 CCAAAGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAA 23665 ||| | ||| | || || ||||| ||||||||||| || ||||||| |||||| ||| Sbjct 1498807 CCATAAACCGGTTACTGGTACAAATAACATAAAGAAATGTAACCAACRTTTATTGGAAAA 1498866 Query 23666 CGCAACCCCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTC 23725 |||||||| |||||||| |||||||| || || || || ||||| ||||| ||||| || Sbjct 1498867 AGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTCTCTTC 1498926 Query 23726 CTCCTGAGT 23734 | ||||| Sbjct 1498927 AGCTTGAGT 1498935 Score = 84.2 bits (92), Expect = 3e-11 Identities = 128/181 (71%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 23480 GTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGAACCATCTTCAGCAGCACGAAT 23539 ||| || | ||||||||| ||||| ||| | ||| | | |||||| || ||||| || Sbjct 1498611 GTTTAAGAGAATATTTTTAGTGTAAAAGTT-TCAAATTCAGGATCTTCCGCTGCACGGAT 1498669 Query 23540 CTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGA 23599 || || || || ||||| ||||| || || ||||| || || | | |||| || Sbjct 1498670 TTCCTGGGAAACGAAGTCATAGGCACGTAGGTTCAGAGCCAGACCGACTACTCCAAGAGC 1498729 Query 23600 AGAGACCCAAAGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATT 23659 | | ||| | ||| | || || ||||| ||||||||||| || ||||||| ||||| Sbjct 1498730 ACTCATCCATAAACCGGTTACTGGTACAAATAACATAAAGAAATGTAACCAACATTTATT 1498789 Query 23660 G 23660 | Sbjct 1498790 G 1498790 >seq197 Length=1060207 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 23550 ACAAAATCATAAGCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAA 23609 || || ||||| ||||| || || ||||| || || | | |||| || | | ||| Sbjct 338128 ACGAAGTCATAGGCACGTAGGTTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCCAT 338187 Query 23610 AGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCA 23669 | ||| | || || ||||| ||||||||||| || |||||||| |||||| ||| ||| Sbjct 338188 AAACCGGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCA 338247 Query 23670 ACCCCGAAGATTTGTGACCAAAAACGATTTGCTGT 23704 ||||| |||||||| |||||||| || || || || Sbjct 338248 ACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGT 338282 >seq169 Length=1290593 Score = 100 bits (110), Expect = 4e-16 Identities = 183/267 (69%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 46980 ATCATCGCGGGAAGAACATGCGAACTTTCTAGGTCAAAATTATCATTTGGACCATATAGG 47039 |||| || ||||| ||||||||| | || | | ||||| ||||| || ||||| | | Sbjct 680166 ATCAATGCAGGAAGCACATGCGAATTCTCGGGATGGAAATTGTCATTCGGCCCATACAAG 680107 Query 47040 TTTGTAGGCATCAAAGAGATAGCATTAAATCCATACTGCTGATGGTATGCCTGACACATC 47099 || || ||||| || ||||||| |||| |||||| |||| || || |||||| Sbjct 680106 TTGGTGGGCATTGCCGAAATAGCATCCCATCCGTACTGCAACCGGTAGGCTTGGCACATC 680047 Query 47100 TTGATACCAGCAATCTTTGCAATAGCATAAGAATCATTACTAGGTTCAAGAGGACCACTC 47159 ||||| || || |||||||| | || || | || || |||| || ||||| || | Sbjct 680046 TTGATGCCGGCGATCTTTGCCACGGCGTACCACTCGTTGGTAGGCTCGAGAGGTCCTGTG 679987 Query 47160 ATTAGATATTCTTCCCTAATAGGTT---GTTCACATAATTTTGGATAAATGCAGGAAGAA 47216 | | || || | || || | || || ||||| ||||||||||| || || Sbjct 679986 AGCAACGCATCCTCAGTGATGGGCTGAGGTGCA---AATTTAGGATAAATGCAAGAGGAG 679930 Query 47217 CCAAGAAATAAAAGTTTCTTAACACCA 47243 ||||| || | || ||||| || ||| Sbjct 679929 CCAAGGAAGAGGAGCTTCTTGACGCCA 679903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665464427795960