Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq17 89.7 5e-13 >seq17 Length=7869039 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || ||||||||||| | ||||| | ||||| || | Sbjct 3558079 ATGCAAATCTTTGTCAAGACTCTAACCGGAAAAACAATCACTCTTGAAGTTGAGAGCTCT 3558020 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || || ||||||| ||||| ||||| || || || || ||| Sbjct 3558019 GATACGATTGATAACGTCAAGGCAAAAATTCAGGATAAGGAGGGCATTCCCCCAGACCAG 3557960 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| || |||| | ||| || || ||||| |||| | | | | | |||||||| Sbjct 3557959 CAAAGGCTAATTTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTTTGGCTGATTACAAC 3557900 Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378 || || || || || ||| | ||| Sbjct 3557899 ATCCAGAAGGAGTCTACCTTGCAT 3557876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445074354060960