Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq3603 645 4e-180 seq199 176 5e-39 seq370 170 2e-37 seq74 152 6e-32 seq120 138 1e-27 seq162 136 5e-27 seq9 118 1e-21 seq66 104 3e-17 seq49 89.7 6e-13 >seq3603 Length=163330 Score = 645 bits (714), Expect = 4e-180 Identities = 745/996 (75%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 ||||| | ||| |||| ||| | || ||| | || |||| ||||||||||| || Sbjct 1446 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 1387 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979 ||||| ||||| || | | |||||| ||||| || || |||| ||| | || || || Sbjct 1386 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATTGCCTTCATTGCTGCTCC 1328 Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039 ||| || |||||||| || || |||||||| || |||| || || | ||||||||||| Sbjct 1327 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAA 1268 Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099 || ||||||||||| || | || | ||| || || ||| | ||||| || || || Sbjct 1267 TATTATCTCTGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTATCCGAT 1208 Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159 ||||||||| ||||| | ||||| ||| | || || |||||||||| |||| | || Sbjct 1207 CTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 1148 Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219 | |||||| | | || | | || ||||| ||||| ||||||||| || ||| Sbjct 1147 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAATGGGAACTTAGTTTCCG 1088 Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279 ||| ||||||||||| ||||| ||||||||| || || || || || ||||| | ||| Sbjct 1087 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 1028 Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339 || ||| | |||| || | |||||||| |||||||||| ||||||||| || || Sbjct 1027 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTCTAGGAAT 968 Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399 |||||||||||| |||| |||| |||||||||| || || |||||||||||||||||||| Sbjct 967 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 908 Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459 || || ||| | ||||| ||||| |||||||| || || || ||| ||||||||| || Sbjct 907 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 848 Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518 | || ||||| | | || || | ||||| ||||| | || || || | | Sbjct 847 TTCCTTGGTAACTTC-TAGTTTAATCAGGGAAACCACTGAAAATGAATCTGCTAATGAAG 789 Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578 |||| | ||||| ||||| ||||| || ||||| ||||| || || ||||| || || | Sbjct 788 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 729 Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638 | || ||||||||||||||||| || ||||| || || ||||| || |||||||| | Sbjct 728 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 669 Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCA--ACCATGGCGTT 179696 |||| ||||| || || || |||||||| |||||| | || | ||| |||||||| || Sbjct 668 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGG--TATCAGCACCATGGCTTT 611 Query 179697 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAA 179756 |||||| || |||||||| |||||||| || | ||||| ||||||| ||||| |||| Sbjct 610 CAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAA 551 Query 179757 CACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAA 179816 ||| ||||| || | | |||||||| | |||||||||||||||||||| ||||| Sbjct 550 CACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 491 Query 179817 CGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 179852 || ||||||||||| || ||||| ||||||| ||| Sbjct 490 TGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 455 Score = 506 bits (560), Expect = 2e-138 Identities = 708/985 (72%), Gaps = 10/985 (1%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| || || ||||| || ||||| || ||| | || |||| ||| ||| | || Sbjct 37080 GACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 37139 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | ||||| ||| | ||||| || ||||| ||||| || | ||| Sbjct 37140 TTAGGAGGTTGGTTCACTGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCT 37199 Query 180171 TCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGACGC 180229 ||||||| | |||||| || ||||||| | || || || || || |||||| | Sbjct 37200 AGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGCCGCAGTTTCTACTCCTGCTAATAG 37258 Query 180230 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTG 180289 | | | |||||| | | ||||| ||||||||||| | || || |||| || || Sbjct 37259 TTTAGCACATTCTTTATTACTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 37318 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| ||| | || || || |||| ||| || |||||||| || || |||| |||| || Sbjct 37319 GTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTCCATGGCGCTTTCGGATTAATAGG 37378 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTAT 180409 || ||| |||| || || ||||| || || | || | || ||||| ||||| || Sbjct 37379 TTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCAATTGCGCCCTTATAATGCAAT 37438 Query 180410 TGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCA 180469 |||||||||| ||| || ||||| ||||| ||||| || || || ||||| ||||| Sbjct 37439 CGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCA 37498 Query 180470 GTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTT 180529 ||| ||||||||||||| || |||||| |||||||| || ||| ||||| | ||| | Sbjct 37499 GTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTC-T 37557 Query 180530 TCTTC--AGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGT 180587 ||||| ||||||| || || ||||| | ||||| || ||||||||||||||||| || Sbjct 37558 TCTTCCAAGGGTTT-CATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGC 37616 Query 180588 ATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTAT 180647 || | |||| || |||||| || || ||||| | || || |||| | ||| ||| Sbjct 37617 GTATTGGGTGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGT--AGAAAATACTTTAT 37674 Query 180648 --GAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAA 180705 |||||||| || ||||| || || || ||| | |||| |||| || || | Sbjct 37675 TCGAAGATGGTGACGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAGA 37734 Query 180706 CTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTA 180765 |||| || |||||||| || |||||||| ||||| || ||||| || |||| ||||| | Sbjct 37735 CTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCA 37794 Query 180766 ACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCT 180825 | || || ||| | ||||| || ||||| ||||| || || | ||| |||||| Sbjct 37795 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTG 37854 Query 180826 CTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGA 180885 || |||| | | ||||| ||||| ||||| ||||| || || ||||| || || | Sbjct 37855 CTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAA 37914 Query 180886 TCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATG 180945 || | ||||| ||||||||||| || || || |||||||| || || || || || || | Sbjct 37915 TCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACTAAAAATATTCTCTTAAACG 37974 Query 180946 AAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTG 181005 |||| | ||||| ||| |||| || ||||| || || |||||| | || ||||||| Sbjct 37975 AAGGGATTCGTGCTTGGATGGCGGCTCAGGATCAGCCTCATGAAAACCTTATATTCCCTG 38034 Query 181006 AAGAAGTTCTACCAAGAGGTAACGC 181030 | || ||||||||| | || ||||| Sbjct 38035 AGGAGGTTCTACCACGTGGAAACGC 38059 >seq199 Length=1013994 Score = 176 bits (194), Expect = 5e-39 Identities = 184/241 (76%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 179614 TCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCT 179673 || || ||||| | |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct 992617 TCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCT 992558 Query 179674 CTTGGCGTGTCA--ACCATGGCGTTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCC 179731 | || | ||| |||||||| |||||||| || |||||| | |||||||| || | Sbjct 992557 TTAGG--TATCAGCACCATGGCTTTCAACCTAAATGGTTTCRATTTCAACCAATCTGTAG 992500 Query 179732 TTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAACCGTGCAGGTTTGG 179791 ||||| ||||||| ||||| ||||| | ||||| || | | ||||| || | | Sbjct 992499 TTGACAGTCAAGGTCGTGTAATTAACTCTTGGGCTGATATTATCAACCGYGCTAACCTTG 992440 Query 179792 GTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGCTGCTG 179851 ||||||||||||||||||| ||||| || ||||||||||| | ||||| ||| ||| || Sbjct 992439 GTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTTTAGACCTAGCTACTGTTG 992380 Query 179852 A 179852 | Sbjct 992379 A 992379 >seq370 Length=242655 Score = 170 bits (188), Expect = 2e-37 Identities = 211/286 (74%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 180285 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTA 180344 || ||||| ||| | || || || |||| ||| || |||||||| || | |||| || Sbjct 138072 CGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTGTTGCTCTCCATGGCDCTTTCGGATTA 138013 Query 180345 ATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAAT 180404 || || || ||| |||| || || ||||| || || | || | || ||||| ||| Sbjct 138012 ATAGGTTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCAATTGCGCCCTTATAAT 137953 Query 180405 GCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTG 180464 || | |||||||||| ||| || ||||| ||||| ||||| || || || ||||| Sbjct 137952 GCATTCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTA 137893 Query 180465 GGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTA 180524 |||||||| ||||||||||||| || |||||| |||||||| || ||| ||||| | Sbjct 137892 GGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 137833 Query 180525 CTCTTTCTTC--AGGGTTTCCACAACTGGACCCTCAACCCCTTCCA 180568 ||| |||||| ||||||| || || ||||| | ||||| ||||| Sbjct 137832 CTC-TTCTTCCAAGGGTTT-CATAATTGGACGTTGAACCCATTCCA 137789 >seq74 Length=3028681 Score = 152 bits (168), Expect = 6e-32 Identities = 178/239 (74%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 179218 CGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGT 179277 ||||| ||||||| ||| ||||| | ||||||||| | | | || | | ||| | | Sbjct 694356 CGTCTGGGTATGCATCCTTGGATTTCTGTTGCATATTAAGGTCTTGTGGTAGATGCTACT 694415 Query 179278 GCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGT 179337 | || ||| | ||||||| | |||||||| |||||||||| ||||||| | || Sbjct 694416 ACTGTCTTCTTGATCTATCCAATTGGTCAAGGAAGCTTCTCTGATGGTATGCCTTTAGGG 694475 Query 179338 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCAC 179397 |||| | ||||||| |||| |||| |||||||| | || | ||||||||||||||||| Sbjct 694476 ATCT-TAGTACTTTCAACTTCATGATTGTATTCTAGGCTTAGGACAACATCCTTATGCAC 694534 Query 179398 CCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCA 179456 || || || ||| | ||||| ||||| ||||| ||| ||||| || ||||||||| Sbjct 694535 CCATTTCACATGTTAGGTGTAGCTGGTATATTCTATGGTTCTCTGTTTGGTGCTATGCA 694593 >seq120 Length=1927911 Score = 138 bits (152), Expect = 1e-27 Identities = 145/188 (77%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 180396 CCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATC 180455 ||||| || || |||||||||| || ||| || | ||| ||||| ||||| || || Sbjct 1770651 CCTTATAACGCAATTGCATTCTTTGTTCCAATTGTTGTTTTTGTTTTTGTATTCCTGATT 1770710 Query 180456 TACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTT 180515 || ||||| |||||||| ||||||||||||| || |||||| |||||||| || ||| Sbjct 1770711 TATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTT 1770770 Query 180516 AGATTCCTACTCTT-TCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGAT 180574 ||||| | ||||| | | ||||||| || || || || | ||||| || |||||||| Sbjct 1770771 CGATTCATCCTCTTATTCTAAGGGTTT-CATAATTGAACGTTGAACCCATTTCATATGAT 1770829 Query 180575 GGGAGTTG 180582 |||||||| Sbjct 1770830 GGGAGTTG 1770837 >seq162 Length=1386390 Score = 136 bits (150), Expect = 5e-27 Identities = 249/365 (68%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 180649 AAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTT 180708 ||||||| || ||||| || || || ||| || ||| |||| || | | || Sbjct 711978 AAGATGGTGACGGTGCAAATACATTCCGTGCTTTTAATCCAATTCAAGCTGAACAGAATT 712037 Query 180709 ACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACA 180768 | || ||||||||||| | ||||| ||||| || ||| | || ||||| |||| || | Sbjct 712038 ATTCAATGGTCACTGCTGATCGCTTTTGGTCCCAAATCCTTGGGATTGCTTTTTACAATA 712097 Query 180769 AGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTA 180828 | || ||| | | ||| || ||||| ||||| | || | ||| |||||| || Sbjct 712098 AACGTTGGTTACGTTTCTTTATGTTATTTGTATCAGTAACCGGTTTATGGATGAGTGCTC 712157 Query 180829 TTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCA 180888 |||| | ||||| |||| ||||| ||||| || || ||||| || || || Sbjct 712158 TTGGAGCAGTCGGTCTGACTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATTC 712217 Query 180889 GAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAG 180948 | ||||||||||||||| | || || | |||||||| || || || || || || |||| Sbjct 712218 GTGCAGCAGAAGATCCTAAATTTGAAATTTTCTACACTAAAAATATTCTCTTAAACGAAG 712277 Query 180949 GACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAG 181008 | | ||| | ||| |||| || ||||| | || |||||| | || ||| ||| | Sbjct 712278 GGATTCGTCCTTGGATGGCGGCTCAGGATCAGTCTCATGAAAACCTTATAATCCTTGACG 712337 Query 181009 AAGTT 181013 | ||| Sbjct 712338 AGGTT 712342 >seq9 Length=10250128 Score = 118 bits (130), Expect = 1e-21 Identities = 192/269 (71%), Gaps = 11/269 (4%) Strand=Plus/Plus Query 180446 ATTTCTC-ATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAG 180504 |||||| || || ||||| |||||||| ||||||||||||| || |||||| |||| Sbjct 5987774 ATTTCTTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCACCTAGTTTTGGTGTAG 5987833 Query 180505 CAGCAATCT--TTAGATTCCTACTCTTTCTTC--AGGGTTTCCACAACTGGACCCTCAAC 180560 |||| || | || ||||| | ||||| |||| |||||||| | || ||||| | ||| Sbjct 5987834 CAGCTATATATTTCGATTCATCCTCTT-CTTCCAAGGGTTTC-ATAATTGGACGTTGAAC 5987891 Query 180561 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCAT 180620 || || ||||||||||||||||| || || | |||| | |||||| || || ||| Sbjct 5987892 CCATTTCATATGATGGGAGTTGCCGGCGTATTGGGTGCTRCTCTGCTATGCGCTATTCAT 5987951 Query 180621 GGCGTAACTGTGGAGAACACACTGTAT--GAAGATGGAGAACAAGCAAACACCTTTAAGG 180678 || | || || | || | ||| ||| ||||||| || ||||| || || | Sbjct 5987952 GGTGCTACCGT--AAAAAATACTTTATTCAAAGATGGCGATGGTGCAAATACATTCCGTG 5988009 Query 180679 CATTTGATTCAACGCAAGAGGAGGAAACT 180707 | ||| | |||| ||| | || || ||| Sbjct 5988010 CTTTTAAGCCAACTCAAAATGAAGAGACT 5988038 >seq66 Length=3234583 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 180891 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGA 180950 ||||| ||||||||||| || || || |||||||| || || || || || || ||||| Sbjct 2573000 GCAGCGGAAGATCCTGAATTTGAAACTTTCTACACTAAAAATATTCTCTTAAACGAAGGG 2572941 Query 180951 CTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAA 181010 | |||| ||| ||||| || ||||| || || |||||| | || |||||||| || Sbjct 2572940 ATTTGTGCTTGGATGGCAGCTCAGGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 2572881 Query 181011 GTTCTACCAAGAGGTAACGC 181030 ||||||||| | || ||||| Sbjct 2572880 GTTCTACCACGTGGAAACGC 2572861 >seq49 Length=4165818 Score = 89.7 bits (98), Expect = 6e-13 Identities = 126/176 (72%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 180774 TGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGC 180833 ||| | ||||| || ||||| ||||| || || | ||| |||||| || |||| Sbjct 1498780 TGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGA 1498721 Query 180834 ATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCA 180893 | | ||||| ||||| ||||| ||||| || || ||||| || || ||| | ||| Sbjct 1498720 GTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCA 1498661 Query 180894 GCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGG 180949 || ||||||||||| || || || || ||||| || || || || || || ||||| Sbjct 1498660 GCGGAAGATCCTGAATTTGAAAC-TTTTACACTAAAAATATTCTCTTAAACGAAGG 1498606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610302112280640