Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=14325340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| |||||| || ||||| ||||| || |||||||| || | ||| | ||||||| Sbjct 9211684 ACCAGGTGCAAGGTCGATTCCTTTTGGATGTTGTAATCTGCAAGAGTACGGCCATCTTCC 9211743 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 |||||||| || ||| | || || |||||||| || ||| | ||| || ||||| Sbjct 9211744 AATTGTTTACCAGCAAAAATTAGTCTTTGTTGATCAGGGGGAATGCCCTCCTTGTC 9211799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409642811154177