Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nelumbo_20nucifera_20[refseq_20GCF_5F000365185.1_202013-08-08] 3,603 sequences; 804,647,751 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 >seq6 Length=10738081 Score = 114 bits (126), Expect = 1e-20 Identities = 382/591 (65%), Gaps = 5/591 (1%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || || ||||| || || | || || || || ||||| || || ||||||||||| Sbjct 5633820 CAAGCGAAATCGCAGTGCAACCCCTCGTCTCTTGATATCAACTCGTTTGAAAATGTTAAC 5633761 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT-CCGGAAAAGAA 23627 || ||||| || || ||||| || | ||| ||||| || ||||| | | || || ||||| Sbjct 5633760 CCCGGCATCAACCCGCGTTTCTTCAACCAGAATATCGC-GCAAAAGCTGCCAGAGAAGAA 5633702 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687 || ||||| || || ||||| || |||||| | || | | | || | Sbjct 5633701 TATCCCCTCGACGCAGGCGAAGGCGACTAGACGTTCGGCGAAAGATTCCG---AACTGGT 5633645 Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTT 23747 |||||| |||||| | ||| ||| || || || || || |||||||| | Sbjct 5633644 AATCCAACGAAGTGTCCACTGAGCTTTCTTTTCCACGCAAGGGATAGTCTCAATTGCGTG 5633585 Query 23748 TAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACAT 23807 || ||| |||| || | ||| | || || | || | | | || ||||| Sbjct 5633584 AAACAGACGGTTTTTCTCGGCTGCATCCTTGATGTAGGATTCTAACAAGAGGCTGTACAT 5633525 Query 23808 TTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAA 23867 || ||||| || || || || || || || || || || || | ||| || || Sbjct 5633524 CTCCGAATGGATGTTCTCGATTGCTATTTGGAAACCGTAGAAGGCACGAGCCTCGGAATT 5633465 Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 |||||| || || | || | || | |||||| |||||||||||||| |||||| Sbjct 5633464 TTGAACTTCTTTCATGAAACGAGAGGCCAGGTTTTCGATAACAATACCATCAGAAGCAGC 5633405 Query 23928 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 ||||| || |||||| | || || ||| | || | | || |||| ||| || Sbjct 5633404 GAAGAAGGCGAGAACAAGAGTAATGAAGTGTTTCTCGCCGTGAGTTAGATTTTCCCAGTC 5633345 Query 23988 ATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTT 24047 | | ||||| || | |||||||| || | ||||| ||| ||| ||| ||| Sbjct 5633344 ACGTAGATCTTGGGAGAGGTCAACTTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTT 5633285 Query 24048 ATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATC 24098 |||||| ||| || ||| | ||| ||||| || || ||||||||| Sbjct 5633284 GTACATTTCCCAGATTTCAGGGTATTGAATTGGGAACATACAGAATCTATC 5633234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521464513484200