Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6 159 5e-34 seq1 141 1e-28 seq854 129 9e-25 seq1898 113 7e-20 seq5239 104 4e-17 seq11 104 4e-17 seq12110 95.1 2e-14 seq8 89.7 8e-13 seq1629 84.2 3e-11 >seq6 Length=97571839 Score = 159 bits (176), Expect = 5e-34 Identities = 181/236 (77%), Gaps = 5/236 (2%) Strand=Plus/Plus Query 124534 ATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA- 124591 ||||| |||||||| ||| | |||||||| ||||| || || || || | ||| |||| Sbjct 19649327 ATACAGATGCAAATCTTTGTTAAGACACTCACAGGAAAGACCATTACACTTGAGGTTGAG 19649386 Query 124592 AGCAAATGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCAC 124650 ||| ||| || ||| ||| |||||||| ||||||||||| |||||||| || || | Sbjct 19649387 AGCTG-TGACACCATTGACAATGTTAAAACA-AAAATTCAAGACAAAGAAGGAATTCCTC 19649444 Query 124651 CTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAG 124710 | |||||||||||| | |||||||| ||||||||| | || ||| |||||||| | | Sbjct 19649445 CAGATCAACAAAGGTTAATTTTTGCTGGAAAACAACTTGAAGATGGTCGAACACTGACTG 19649504 Query 124711 ATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||| ||||| || ||||| ||| | ||| | || || ||| | || || ||| Sbjct 19649505 ATTATAACATTCAGAAGGAATCCACTCTCCATCTTGTGTTGCGTCTTCGTGGAGGT 19649560 Score = 129 bits (142), Expect = 9e-25 Identities = 157/209 (75%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAATGATACAAT 124606 || || ||||| || || || || || ||||| | ||| |||| ||| | || || || Sbjct 19666781 TTAATTAAGACCCTTACTGGAAAGACCATAACACTGGAGGTTGAGAGCTCA-GACACCAT 19666839 Query 124607 TTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGC 124665 | ||| |||||||| || |||||||| || ||||| || || || || ||||||||| Sbjct 19666840 TGACAATGTTAAAACA-AAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAACAAAGGT 19666898 Query 124666 TTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAA 124725 | |||||||| ||||||||| | || ||| |||||||| | | ||||| |||||||||| Sbjct 19666899 TGATTTTTGCTGGAAAACAACTGGAAGATGGTCGAACACTTGCTGATTACAATATTCAAA 19666958 Query 124726 AAGAATCAACTTTGCATTTGGTTTTACGT 124754 | ||||| || | ||| | || || ||| Sbjct 19666959 AGGAATCCACACTCCATCTTGTGTTGCGT 19666987 >seq1 Length=110538649 Score = 141 bits (156), Expect = 1e-28 Identities = 176/237 (74%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 124534 ATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA- 124591 ||||| ||||| || ||| ||||||| || || ||||| ||||||||| | || |||| Sbjct 86551544 ATACAGATGCAGATCTTTGTAAAGACTCTTACTGGCAAGACTATAACTCTCGAAGTTGAG 86551485 Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651 || | || | || ||| | ||| |||||| || || ||||||||||| ||||| Sbjct 86551484 AGTTCA-GACATGATCGACAATGTTAAAGCGAAAATCCAGGACAAAGAAGGTATTCCACC 86551426 Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711 ||||||||| | | || ||||||||||||||| | |||||| | || || | | || Sbjct 86551425 AGATCAACAACGTTTGATCTTTGCAGGAAAACAACTTGAGGATGGACGGACTCTCGCTGA 86551366 Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| |||||||| || |||||| | || | ||| | ||| |||| ||||| || Sbjct 86551365 TTATAACATTCAAAAGGAGTCAACTCTCCACCTTGTTCTTCGTCTACGTGGTGGAAT 86551309 Score = 140 bits (154), Expect = 5e-28 Identities = 152/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||||||| | |||||| | || || ||||| || || | || |||| ||| Sbjct 86551311 AATGCAAATATTTGTTAAGACATTGACTGGAAAAACAATCACATTGGAAGTTGAGAGCTC 86551252 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || || ||| ||| | || ||||||||||||||| |||||||| ||||| || | Sbjct 86551251 G-GACACTATTGATAACGTTAAGGCGAAAATTCAAGATAAGGAAGGTATTCCACCGGACC 86551193 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 |||||||||| |||||||| || || ||||| || ||| | || || | | |||||||| Sbjct 86551192 AACAAAGGCTGATTTTTGCTGGGAAGCAATTGGAAGATGGGCGCACTCTGGCAGATTATA 86551133 Query 124717 ATATTCAAAAAGAATCAAC 124735 |||||||||| || ||||| Sbjct 86551132 ATATTCAAAAGGAGTCAAC 86551114 Score = 129 bits (142), Expect = 9e-25 Identities = 174/239 (73%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 124533 AATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA 124591 |||||| ||||| || ||| | || || |||| || ||||| || || | || |||| Sbjct 85489181 AATACAGATGCAGATCTTTGTTAAAACCTTAACTGGAAAAACCATCACACTGGAAGTTGA 85489240 Query 124592 AGCAAATGATACA--ATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCA 124649 | || | | ||| || |||| | || |||||||||||| || || ||||| ||| Sbjct 85489241 A--AACTCAGACACGATAGATAATGTTAAGGCGAAAATTCAAGACAAGGAGGGTATTCCA 85489298 Query 124650 CCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAA 124709 || ||||| || ||||| || |||||||| || ||||| || ||| | || ||| | | | Sbjct 85489299 CCGGATCAGCAGAGGCTGATATTTGCAGGGAAGCAATTGGAAGATGGGCGTACACTCGCA 85489358 Query 124710 GATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||||||| || |||||| | || | ||| | | ||| | ||||| || Sbjct 85489359 GATTATAATATTCAAAAGGAGTCAACTCTCCACCTTGTTCTCAGGTTAAGGGGTGGAAT 85489417 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | || || | || || |||||||| ||| | || |||| ||| Sbjct 14110192 ATGCAAATCTTTGTGAAAACCTTGACTGGGAAAACTATTACTCTTGAAGTTGAGAGCTCG 14110251 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || ||| | || |||||||||||||| ||||| || |||||||| || Sbjct 14110252 -GACACCATCGACAATGTGAAGGCAAAAATTCAAGATAAGGAAGGGATTCCACCTGACCA 14110310 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || |||||||||||||| || || || | |||||| | | || |||| ||||| || Sbjct 14110311 GCAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACTTTAGCTGATTACAA 14110370 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || |||||||| | |||||||| | || | | |||||||| Sbjct 14110371 CATCCAGAAGGAATCAACCCTCCATTTGGTGCTGCGCCTGAGGGGTGGTAT 14110421 Score = 113 bits (124), Expect = 7e-20 Identities = 173/243 (71%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| | || || || || || || | ||| |||| ||| Sbjct 14110648 ATGCAGATTTTTGTTAAGACTTTGACTGGGAAGACGATCACCCTGGAGGTTGAGAGCTCG 14110707 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | || || ||||| ||||| || ||||| ||||| || || Sbjct 14110708 -GATACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATTCCACCAGACCA 14110766 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| |||||||| || || || | |||||| |||| || | | |||||||| Sbjct 14110767 GCAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACCCTTGCTGATTATAA 14110826 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG-TATTAAAAATT 124776 ||||| |||||||||||| | || ||||| | ||| | || ||||| | || | |||| Sbjct 14110827 CATTCAGAAAGAATCAACTCTTCACCTGGTTCTTCGTCTCCGTGGTGGCTTTTGATAATT 14110886 Query 124777 CAT 124779 || Sbjct 14110887 TAT 14110889 Score = 107 bits (118), Expect = 3e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||| || | ||||| || ||||| || | ||| |||| Sbjct 14109964 ATGCAGATCTTTGTAAAAACTTTGACAGGAAAGACTATTACCCTTGAGGTTGAGAGTTCC 14110023 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | ||| ||||| || ||||||||||| || || || ||||| Sbjct 14110024 GATACAATTGACAATGTCAAAGCTAAAATCCAGGATAAAGAAGGCATTCCTCCAGATCAG 14110083 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || || || ||||| ||| | |||||| |||| || | | || || ||| Sbjct 14110084 CAGAGGTTGATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACCCTTGCTGACTACAAT 14110143 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747 ||||| || ||||| ||| | ||| |||| Sbjct 14110144 ATTCAGAAGGAATCCACTCTCCATCTGGT 14110172 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||| |||||||| |||||||| ||||| ||||||||| | | || |||||||||||| Sbjct 85489500 AAAATCCAAGATAAGGAAGGTATTCCACCAGATCAACAACGTTTGATCTTTGCAGGAAAA 85489559 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || | |||||| | || || | | ||||| ||||||||||| || ||||| | || Sbjct 85489560 CAGCTCGAGGATGGGCGTACTCTCGCGGATTACAATATTCAAAAGGAGTCAACACTCCAC 85489619 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 | ||| | ||| | || ||||| || Sbjct 85489620 CTTGTTCTTCGTCTCCGTGGTGGAAT 85489645 Score = 104 bits (114), Expect = 4e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| ||| | ||||| |||| || ||||| || || | || |||| ||| Sbjct 86551083 AATGCAAATTTTTGTTAAGACCTTAACTGGAAAAACAATCACGTTGGAAGTTGAGAGCTC 86551024 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || || || ||| | || ||||||||||| || || ||||| ||||| |||| Sbjct 86551023 G-GACACGATAGACAATGTTAAGGCTAAAATTCAAGACAAGGAGGGTATCCCACCGGATC 86550965 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||||| |||||||| || || |||||||| ||| | ||||| | | ||||||| Sbjct 86550964 AGCAGAGGCTGATTTTTGCTGGGAAGCAATTAGAAGATGGACGAACTCTGGCTGATTATA 86550905 Query 124717 ATATTCAAAAAGAATCAAC 124735 | || || || ||||| || Sbjct 86550904 ACATCCAGAAGGAATCCAC 86550886 Score = 95.1 bits (104), Expect = 2e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | |||||| | ||||| |||||||| || | || |||| ||| Sbjct 14110420 ATGCAGATCTTTGTGAAGACATTGACAGGGAAAACTATCACCCTTGAAGTTGAGAGCTCG 14110479 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || ||| | || ||||||||||| || ||||| || |||||||| || Sbjct 14110480 -GACACCATCGACAATGTGAAGGCTAAAATTCAAGACAAGGAAGGAATCCCACCTGACCA 14110538 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | ||||||||||| || || | ||||| | | || | | |||||||| Sbjct 14110539 GCAGAGGTTGATTTTTGCAGGGAAGCAGCTTGAGGACGGGAGGACTCTTGCTGATTATAA 14110598 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || || | |||||||| | || || |||| || || Sbjct 14110599 CATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGATTGAGAGGAGGGAT 14110649 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || || || || || || | ||| | || | Sbjct 85489872 ATGCAGATCTTTGTGAAGACGTTGACGGGGAAGACGATCACGTTGGAGGTGGAGAGTTCT 85489931 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || || || ||||| || ||||| ||||| || || Sbjct 85489932 GATACCATTGACAATGTGAAGGCCAAGATACAGGATAAGGAGGGTATCCCACCAGACCAG 85489991 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || || ||||||||||| |||||||| || ||| | | || | | |||||||||| Sbjct 85489992 CAGAGACTGATTTTTGCAGGGAAACAATTGGAAGATGGAAGGACTCTTGCAGATTATAAT 85490051 Query 124719 ATTCAAAAAGAATCAAC 124735 |||||||| ||||| || Sbjct 85490052 ATTCAAAAGGAATCCAC 85490068 Score = 95.1 bits (104), Expect = 2e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| ||| | ||||| |||| || ||||| || || | || |||| ||| Sbjct 85490099 AATGCAAATCTTTGTTAAGACCTTAACTGGAAAAACAATCACGTTGGAAGTTGAGAGCTC 85490158 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || || || ||| | || ||||||||||| || ||||| || ||||| |||| Sbjct 85490159 G-GACACGATAGACAATGTTAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCGGATC 85490217 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||||| |||||||| || |||||||| || || | | || | | || |||| Sbjct 85490218 AGCAGAGGCTGATTTTTGCTGGGAAACAATTGGAAGACGGGAGGACTCTTGCTGACTATA 85490277 Query 124717 ATATTCAAAAAGAATCAAC 124735 | |||||||| || ||||| Sbjct 85490278 ACATTCAAAAGGAGTCAAC 85490296 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | || || || || |||| || ||||| ||||| || || Sbjct 86550796 GATACCATTGATAATGTGAAGGCCAAGATACAGTATAAGGAGGGTATCCCACCAGACCAG 86550737 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||||||||| ||||||||||| ||| | |||| ||| |||||||| Sbjct 86550736 CAAAGATTGATTTTTGCAGGGAAACAATTAGAAGATGGAAGAACTCTAGCTGATTATAAC 86550677 Query 124719 ATTCAAAAAGAATCAAC 124735 |||||||| || || || Sbjct 86550676 ATTCAAAAGGAGTCGAC 86550660 >seq854 Length=364260 Score = 129 bits (142), Expect = 9e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| ||||| || || || || ||| | ||| | || ||| Sbjct 70181 ATGCAAATATTTGTCAAGACTCTAACTGGGAAGACCATCACTTTGGAGGTGGAGAGC-TC 70239 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | ||| ||| ||||| || || || ||||| ||||| ||||| Sbjct 70240 TGATACTATTGATAACGTGAAAGCGAAGATTCAGGACAAGGAGGGTATTCCACCAGATCA 70299 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| |||||||| || || || | |||||| |||| || | | ||||||||| Sbjct 70300 GCAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACCCTTGCAGATTATAA 70359 Query 124718 TATTCAAAAAGAATCAAC 124735 || || |||||||| || Sbjct 70360 CATCCAGAAAGAATCCAC 70377 Score = 123 bits (136), Expect = 4e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | |||||||| ||||| || || || || | ||| ||||| | Sbjct 69953 ATGCAGATCTTTGTGAAGACACTGACAGGGAAGACAATCACCTTGGAGGTTGAAAGTTCT 70012 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| |||| |||| ||| || |||||||||||||| || || || ||||| Sbjct 70013 GATACAATTGATAATGTAAAGGCGAAGATCCAAGATAAAGAAGGGATTCCGCCAGATCAG 70072 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| || || || | |||||| | | || | | ||||||||| Sbjct 70073 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTATAAT 70132 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTT 124756 || || ||||| || || |||||||||| ||||||| Sbjct 70133 ATCCAGAAAGAGTCCACACTGCATTTGGTGCTACGTTT 70170 >seq1898 Length=217218 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| |||||||||| || || ||||| || ||| | ||| |||| || | Sbjct 78187 ATGCAGATCTTTGTAAAGACACTCACTGGGAAAACCATTACTCTCGAGGTTGAGAGTTCA 78246 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | || ||||||||||| || ||||| || || || || || Sbjct 78247 -GACACAATTGATAACGTGAAGGCCAAAATTCAAGACAAGGAAGGGATTCCCCCAGACCA 78305 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| ||||| || | || ||| | ||||| | | ||||| || Sbjct 78306 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACTCTTGCTGATTACAA 78365 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| || || || | || | || | ||| |||| ||||| || Sbjct 78366 TATTCAAAAGGAGTCTACCCTCCACCTTGTCCTCCGTCTACGTGGTGGCAT 78416 Score = 95.1 bits (104), Expect = 2e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | ||||| | ||||| |||||||| || | ||| |||| || | Sbjct 78643 ATGCAAATCTTCGTCAAGACTTTGACAGGAAAAACTATCACCTTGGAGGTTGAGAGTTCA 78702 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | || ||||||||||| || ||||| || || || || || Sbjct 78703 -GACACAATTGATAACGTGAAGGCCAAAATTCAAGACAAGGAAGGGATTCCCCCAGACCA 78761 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || |||||||| || ||| | || ||| | | ||| | | |||||||| Sbjct 78762 GCAGCGGTTGATATTTGCAGGGAAGCAACTTGAAGATGGAAGGACACTTGCTGATTATAA 78821 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || || | ||| |||| || ||||| | || ||||| Sbjct 78822 CATACAGAAGGAGTCGACACTTCATCTGGTGTTGCGTTTGAGGGGAGGTAT 78872 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| |||||| | || || | ||||| || || || ||| | || | || ||| Sbjct 78871 ATGCAGATATTTGTCAAAACTTTGACAGGAAAGACCATCACTTTGGAAGTGGAGAGCTC- 78929 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | || |||||||| ||||||||||| || ||||| ||||| Sbjct 78930 TGACACTATTGACAACGTCAAGGCCAAAATTCAGGATAAAGAAGGGATCCCACCAGATCA 78989 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| || || || | |||||| | || || | | |||||| || Sbjct 78990 GCAGAGGCTCATATTTGCTGGTAAGCAGCTGGAGGATGGGCGCACCCTTGCAGATTACAA 79049 Query 124718 TATTCAAAAAGAATCAAC 124735 ||| ||||| ||||| || Sbjct 79050 TATCCAAAAGGAATCCAC 79067 >seq5239 Length=66816 Score = 104 bits (114), Expect = 4e-17 Identities = 656/1001 (66%), Gaps = 127/1001 (13%) Strand=Plus/Plus Query 228195 taaattaaatattagtaattgtaatataataaatgctagttctttaaaaaatttaat-ta 228253 |||||||||||||| || |||||||||||| || | ||||||| | | ||| | Sbjct 21941 TAAATTAAATATTATTA----TAATATAATAAAA--TAATATTTTAAAATAATAAATATT 21994 Query 228254 atttaaaagaattggatatatctaacaat-tataatataaatatttCATCATTACCaaaa 228312 || | ||| | | | |||| ||| ||| ||||| || ||||| || || || Sbjct 21995 ATATTAAATATTATTA-ATATATAATAATATATAAATTATATATTAAATAAT------AA 22047 Query 228313 acattaattaaattaaatattagttcatgtaatataaaaaatactaattttataattaat 228372 | || || |||||| |||||| || || ||| || || | || ||||| || Sbjct 22048 ATATATAT-AAATTATATATTAT---ATATATTAT------TATTATTATTTTAATTTAT 22097 Query 228373 ttagataatt-tGAAAGA---ATTAGATATATCTAGAAATTTTA-ATATAAATATTTCAT 228427 || |||| | | ||| | || | |||||| || |||||| | ||||| | | || || Sbjct 22098 TTGAATAACTATTAAATATTAATAAAATATAT-TA-AAATTTAATATATATACAATTAAT 22155 Query 228428 CATTACCAAAATCATTAATCAAATTAAATATTAGGACATGTTATATAAAA-AATACTAAT 228486 | | || || |||||| ||||||||||| |||||||| |||| ||| Sbjct 22156 CTT----AATATAATTAAT--AATTAAATATT---------TATATAAATTAATAATAAA 22200 Query 228487 TTTATAATTAAT--TTAGATAATTTG---AAAGAATTAGATA-----TATCTAGAA---A 228533 | |||||| || ||| | ||| | ||| ||||| ||| ||| || || | Sbjct 22201 TATATAATAAAAAATTATAAAATATATATAAAAAATTATATAATAAATAT-TATAACTAA 22259 Query 228534 TTTTAATA------TA-AATATTTCATCATTACCAAAATCATTGATTACATTAAATATTA 228586 || ||||| || ||||| | || |||| |||| |||| || |||| || | Sbjct 22260 TTATAATAATTTATTATAATATAT-ATAATTAT--AAATT-TTGAATAAATTATATTTAT 22315 Query 228587 ATTC----ATGTTATATAAAACACACTAATTTTATAAATGATTTATATAATTTGA-AGGA 228641 ||| || |||| ||| | | |||| ||||||| ||| ||||||||| | | | Sbjct 22316 ATTATAAAATATTATTTAATAAA---TAATATTATAAAATATT-ATATAATTTTATATAA 22371 Query 228642 ATTGGATATATCTAGAAATTATAATATAAATATTTCATCATTACCAAAATCATTAATCAA 228701 ||| ||| || ||| ||| ||||||||| | | |||| || || || | || Sbjct 22372 ATTTAATAAAT-----AATAATATTATAAATATATTTTAATTAT-AATATAATATAAAAA 22425 Query 228702 ATTAAATAT---TAGTGATTGCGATATTAAAAATACTAATTTTATAAATGATTTAGATAA 228758 || |||||| | | ||| ||| ||||| |||| | ||| || ||| |||| Sbjct 22426 ATGAAATATATATTTTAATTATAATAATAAAA----TAATATAATATATA--TTAAATAA 22479 Query 228759 TTTGAAAGAATTAGATATATC-TAACAATT-ATA---ATATAA-ATATTTCATCATTACC 228812 ||| || || | |||||| ||| ||| ||| ||||| |||| | || |||| Sbjct 22480 TTTTTAAATAT-ATATATATTATAATTATTTATATCTATATATTATATATTATTATTATA 22538 Query 228813 AAAAACATTGACTACATTAAATATTAGTTCATGTAATATAAAAAATACtaattt-tataa 228871 || || | | | || ||| | ||||| | ||||||| | | ||| | ||||| Sbjct 22539 AAGAATAATTAATATTATAATTTATAGTTTAATAAATATAATTATAAAAAATATATATAA 22598 Query 228872 ttaatttagataatttgaaagaattagatatatctaaaaattttaa-tataaatatt-tC 228929 |||| || |||||| | | | | | |||||| ||||||| | || |||||||| | | Sbjct 22599 ATAATATA--TAATTTAATAAATTAATATATATATAAAAATATAAAATATAAATAATATT 22656 Query 228930 ATCATTACCAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAACCATACTAA 228989 || || | ||||| || || ||||| || ||||| || || |||| | ||| ||| Sbjct 22657 ATTATAATTAAAAT--TTAAT---ATTAA-TAATAATTAATATT-TATATAT-ATA-TAA 22707 Query 228990 TTTTATAAATGATTTATATAATTTGAAAGAATTAGATATATCTAACAATTATAATATAAA 229049 || ||| | ||||| ||||||| | | || | ||| || ||||||||||| || Sbjct 22708 TTATATTAT--ATTTAAATAATTTTATAATTTTTAACTTAT--AATAATTATAATATTAA 22763 Query 229050 TATTTCATCATTACCAAATA--CATTAATTGAATTAAATATTA-GTTCGTGTTATATAAA 229106 || | | || | ||||| ||||||| |||| | | | | || | | ||| | Sbjct 22764 TAATATTTTATAAATAAATAATTATTAATTTAATTTATTTTAATATTAATATAATAAATT 22823 Query 229107 AAATACTAATTTTATAATTAATTTAGATAATTTGAAAAAAT 229147 |||| ||| ||||||||| ||| || || ||||||||| Sbjct 22824 TAATAAAAATAATATAATTAA-TTAAAT-ATATGAAAAAAT 22862 Score = 84.2 bits (92), Expect = 3e-11 Identities = 641/973 (66%), Gaps = 126/973 (13%) Strand=Plus/Plus Query 228171 taataatttaacaaaatcgttaattaaattaaatattagtaattgtaatataataaatgc 228230 ||||||||||| | || |||| ||| ||||| ||| || | | |||| ||||| Sbjct 20129 TAATAATTTAATATAAAA-TTAA--AAAATAAAT-TTAATA--TCTTATATT-TAAAT-- 20179 Query 228231 tagttctttaaaaaatttaat----taat-ttaaaagaattggatata--tctaacaatt 228283 || || |||| ||| ||||| |||| ||| || ||| || || | ||| || Sbjct 20180 TATTTAATTAATAAAATTAATAAAATAATATTATAATAATATAATGTAAATTTAATTTTT 20239 Query 228284 a-taatataaatat--ttCATCATTACCaaaaacattaattaaattaaatattagttcat 228340 | || ||||||||| ||| |||| || || ||||| || ||||| || || || Sbjct 20240 AATATTATAAATATAATTCT--ATTA--AATAATATTAAATATATTAATAATATATTAAT 20295 Query 228341 gtaatataaaaa-atactaattttataatta-atttagataatttGAAAGAATTAGATAT 228398 |||||||||| ||| ||| || |||| || ||||| | ||||| || | ||| | | Sbjct 20296 --AATATAAAAATATA-TAAATTAATAAATATATTTATAAAATTTATAA-ATTTATACAA 20351 Query 228399 ATCTAGAAATTTTAATATAAATATTTCATCATTACCAAAATCATTAATCAAATTAAATAT 228458 || | || |||||||||| | | || |||| | ||| | || | |||||| ||| Sbjct 20352 ATAGATAACATTTAATATAA---TATAAT-ATTAT-ATAATAAATATT--AATTAA-TAT 20403 Query 228459 TAGGACATGTTATATAAAAA--ATACTAATTTTATAATTAATTTAGATAATTTGAAAGAA 228516 || | || || ||||| | ||| ||||| | || || |||| ||| || || | Sbjct 20404 TAATATATAATAAATAAATATAATA-TAATTATTTA--TATTTTA-ATATTTAAAATTAT 20459 Query 228517 TTAGATATATCT----AGAAATTTTAA-TATAAATATTTCATCAT--TACCAAAATCATT 228569 ||| |||||| | | |||| |||| ||||||||||| | || || ||||| || Sbjct 20460 TTATATATATATGAATACAAATATTAAATATAAATATTTTAAAATTATATTAAAATAATA 20519 Query 228570 GATTACATTAAAT-ATTAATTCATGTTATATA---AAACACACTAATTTTATAAATGATT 228625 | | ||| ||| ||||| || ||||| | || | | ||| || | ||| ||| Sbjct 20520 TTTAATATTTAATAATTAA---ATTTTATAAATATTAATATA-TAAATTAAAAAAATATT 20575 Query 228626 TATATAATTTGAAGGAATTGGATATATCTAGAAATTATAATATA--AATATTTCATCATT 228683 || ||||| | || ||| ||||| | |||||||||| | ||||||| || Sbjct 20576 TAAATAATAT-AATATATT---TATATTAATTAATTATAATAAAATAATATTT----ATA 20627 Query 228684 ACCAAAATCATTAATCAAATTAAATATT-AGTGATTGCGATATT--AAAAATACTAATTT 228740 | || | ||||| | ||| |||||| | | | | ||||| | | ||| ||| | Sbjct 20628 AAATAATTTTTTAATAATATT-AATATTAAATAAATTTAATATTTAATATATATAAATAT 20686 Query 228741 TATAAATGATTTAGATAATTTGAAAGAATTAGATATATCTAACAATTATAATATAAATAT 228800 ||| | ||||| ||||| || | || |||||| || | | ||||||||| ||| Sbjct 20687 TATTA--TATTTA---AATTT--AATATATA-ATATATATAGCTAATATAATATATATA- 20737 Query 228801 TTCATCATTACCAAAAACATTGACTACATTAAATATTAGTTCATGTAATATAAAAAAT-- 228858 | |||| | ||| ||| || |||||| |||| | || || |||||||| Sbjct 20738 ---AATATTA-TATAAATATT--ATATATTAAA-ATTA--TTATAATATTTAAAAAATTT 20788 Query 228859 --ACtaattttata-attaatttagataatttgaaagaattagatatatctaaaaatttt 228915 ||||| |||| || |||| | |||| | ||| ||||| | | | || |||| || Sbjct 20789 TATATAATTATATATATAAATTAAATTAATATAAAATAATTAAAAAAAATTATAAATATT 20848 Query 228916 aatataa--------------atatttCATCATTACCAAAATCATTGATTA-CATTAAAT 228960 | ||||| |||| | || |||| ||||| ||| |||| ||||||| Sbjct 20849 ATTATAATTCAAAATTTATTTATATATTATAATTA-TAAAAT-ATT-ATTATAATTAAAT 20905 Query 228961 ATTAATTCATGTTATATAAACCATACTAATTTTATAAATGATTTATATAATTTGAAAGAA 229020 ||| | || ||||||||| || ||| | || | | ||||||||| | | || Sbjct 20906 TTTA--TAATTTTATATAAA-TATTATAAAATAGTATTTATTATATATAATTAAATATAA 20962 Query 229021 TTAGATATATCTAACAATTATAATATAAATATTTCATCATTACCAAATACATTAATTGAA 229080 ||| ||| ||| | |||| ||||||||||| || || ||||| |||||| || Sbjct 20963 TTATTTAT---TAATA--TATATTATAAATATTT-ATAAT--ATAAATATTTTAATTTAA 21014 Query 229081 TTAAATATTAGTT 229093 || |||||| || Sbjct 21015 TT--ATATTAATT 21025 >seq11 Length=61252062 Score = 104 bits (114), Expect = 4e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || || |||||||| ||||| |||||||| || ||| | |||||||| |||||||| || Sbjct 13809775 CAGGACAAAGAAGGGATACCTCCTGATCAGCAGAGGTTGATTTTTGCTGGAAAACAGTTG 13809834 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || ||| ||||||| | | ||||| ||||| || ||||||||||| | || ||||| Sbjct 13809835 GAAGATGGTCGAACTCTGGCTGATTACAATATCCAGAAAGAATCAACACTTCACCTGGTT 13809894 Query 124749 TT 124750 || Sbjct 13809895 TT 13809896 >seq12110 Length=10092 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || ||||||||||| ||||| |||||||| || || || |||||||| || ||||| || Sbjct 4558 CAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAGTTG 4499 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || ||| | || || | | ||||| || ||||| |||||||||||| | || | ||| Sbjct 4498 GAAGATGGGCGGACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCACCTTGTT 4439 Query 124749 TT 124750 || Sbjct 4438 TT 4437 >seq8 Length=47755514 Score = 89.7 bits (98), Expect = 8e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || ||||| || || || ||||| || || ||||| || ||||| |||||||| || || Sbjct 5426752 AAGATTCAGGACAAGGAGGGTATCCCGCCGGATCAGCAGAGGCTGATTTTTGCTGGGAAG 5426693 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||||| || ||| | | || | | |||||||||||||| || || |||||| |||| Sbjct 5426692 CAATTGGAAGATGGAAGGACTCTGGCTGATTATAATATTCAGAAGGAGTCAACTCTGCAC 5426633 Query 124743 TTGGTTTTACGTTTACGAGGTGGT 124766 | || | ||| | || |||||| Sbjct 5426632 CTTGTCCTCCGTCTCCGTGGTGGT 5426609 >seq1629 Length=244661 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | || || || || || || ||||| ||| | ||| | || ||| | Sbjct 134145 ATGCAAATCTTTGTTAAAACTCTGACCGGAAAGACTATTACTCTTGAGGTCGAGAGCTCA 134204 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || || || || ||||| || ||||| || |||||||| Sbjct 134205 -GACACCATTGACAATGTCAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCA 134263 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||| | |||||||| || || ||| | || ||| || |||| | | || || || Sbjct 134264 ACAAAGGTTGATTTTTGCTGGCAAGCAACTTGAAGATGGTAGAACTCTTGCTGACTACAA 134323 Query 124718 TATTCAAAAAGAATCAAC 124735 || || || || || || Sbjct 134324 CATCCAGAAGGAGTCCAC 134341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755104769619200