Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2 114 1e-20 seq854 107 2e-18 seq1898 104 3e-17 seq1 102 9e-17 seq1591 100 3e-16 seq8 100 3e-16 seq1629 93.3 5e-14 seq116 84.2 2e-11 seq6 84.2 2e-11 >seq2 Length=96359640 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| |||||| || || ||||||||||| || || || | Sbjct 95422849 ACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCC 95422790 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||| || || ||||| ||||| | ||||||||| | || | || ||||| Sbjct 95422789 ATCTTCAAGCTGTTTTCCGGCGAAAATGAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTT 95422730 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| ||| || | ||| | | | |||||| ||||| || || | |||| Sbjct 95422729 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 95422671 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 |||| || ||||| || || || || ||||| ||||| || Sbjct 95422670 TGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTT 95422631 Score = 82.4 bits (90), Expect = 9e-11 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 60042 AAATTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGT 60101 ||||||| || | ||||| || | || || ||| ||||||||| |||| ||||||| Sbjct 95246460 AAATTAAAATT-ACAAAAAAATTACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGT 95246402 Query 60102 GACAGGCGGACATACTCACCACTATACTAC 60131 ||||||||| ||||||||||||||||||| Sbjct 95246401 GACAGGCGGGAATACTCACCACTATACTAC 95246372 >seq854 Length=364260 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || ||||| | ||||||||||| |||| ||| || || ||||| |||||||| Sbjct 70179 CCTCCCCTCAAACGTAGCACCAAATGCAGTGTGGACTCTTTCTGGATATTATAATCAGCA 70120 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||||| | | || || |||||||||||||| || || | ||||||||| || | ||| Sbjct 70119 AGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGCGG 70061 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || ||||| || || ||||| || | || ||||||||||| ||||| || Sbjct 69231 TCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 69172 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | | |||||| |||| || | | ||||||||| ||| | || | |||| | Sbjct 69171 ATCAACCTCTGCTGATCGGGAGGAATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 69113 Query 43112 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| ||| || || |||| || |||||||| || || || ||||| Sbjct 69112 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTGAGTGTCTT 69056 Query 43169 TACAAAGATTTGCAT 43183 ||||||||||||||| Sbjct 69055 TACAAAGATTTGCAT 69041 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||| ||||| |||||||| | || || |||||||| ||||| || Sbjct 69916 CTCCTTTTGAATATTGTAGTCAGCAAGAGTCCGTCCATCCTCAAGCTGCTTTCCAGCAAA 69857 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 || | | ||||||||| | || | || ||||| ||| ||| || Sbjct 69856 AATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTT 69809 >seq1898 Length=217218 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 78378 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 78319 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || | ||||||||| | || | | ||||||| | ||| |||| | || | Sbjct 78318 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGT 78260 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| || || |||| || |||||||| || || || |||| Sbjct 78259 TATCAATTGTGTCTGAACTC---TCAACCTCGAGAGTAATGGTTTTCCCAGTGAGTGTCT 78203 Query 43168 TTACAAAGATTTGCAT 43183 |||||||||| ||||| Sbjct 78202 TTACAAAGATCTGCAT 78187 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/196 (72%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| ||||||||||| || || || ||| | || || |||||||||||||| ||| Sbjct 79061 TCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 79002 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| | |||||| || | || | | || || ||| ||| |||| | |||| ||| Sbjct 79001 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTATCC-TGAATTTTGGCCTTGA-CGT 78944 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | |||||||| || || || | || | Sbjct 78943 TGTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTT 78887 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 78886 TGACAAATATCTGCAT 78871 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||| | ||||||||| | || ||||| |||||||||||||| || Sbjct 78641 CCTCCCCTCAGACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGCA 78582 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || || || || ||||| ||||| | | ||||||||| | || Sbjct 78581 AGGGTCCTTCCATCCTCGAGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGGA 78522 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||||| ||| ||| || | | | || || || |||| || Sbjct 78521 ATACCCTCCTTGTCCTGGATCTTTGCCTTTACATTGTCGACGGTATCTGAGCTC---TCA 78465 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| || |||||||||| || || ||||| || ||||| Sbjct 78464 ACTTCAAGGGTGATCGTCTTGCCCGTTAAAGTTTTAACAAAAATCTGCAT 78415 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || ||||||||||||| ||| | ||| |||||| || || || |||||||| Sbjct 78869 CCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCA 78810 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || || ||||| || || ||||| | ||||||||||| | || Sbjct 78809 AGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAACCGCTGCTGGTCTGGGGGA 78750 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||| | ||| |||| | || | | | | ||||| ||| || Sbjct 78749 ATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTC---TC 78694 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| ||||| || || | ||||| || ||||||||||| Sbjct 78693 AACCTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 78643 >seq1 Length=110538649 Score = 102 bits (112), Expect = 9e-17 Identities = 143/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| || || ||||| ||||||| | |||| || | || || ||||| || Sbjct 85490291 CTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCGTCTTCCAATTGTTTCCCAGCAAA 85490232 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | |||||| || | || | || ||||||| | ||| |||| | | | | | Sbjct 85490231 AATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTGT-CTTGAATTTTGGCCTTAACAT 85490173 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| |||| || || || | |||||| ||||| || |||| |||| Sbjct 85490172 TGTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCT 85490116 Query 43168 TTACAAAGATTTGCATT 43184 | ||||||||||||||| Sbjct 85490115 TAACAAAGATTTGCATT 85490099 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || || || | || ||| | ||| | || |||||| || |||||||| || || Sbjct 86550401 TCCACCCCTCAACCTCAGCACAAGATGGAGCGTAGACTCCTTCTGGATATTGTAGTCTGC 86550460 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||| |||| | || || | ||| || ||||| || ||||| | ||||||||||| ||| Sbjct 86550461 CAGTGTCCTACCATCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCGGGCGG 86550520 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||| ||| || || || | | | | |||||| |||| || Sbjct 86550521 AATACCTTCCTTATCCCGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTC---TC 86550577 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||||||||||| ||||||| || || ||||||||||||||| Sbjct 86550578 AACTTCTAATGTGATGGTTTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 86550629 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || || |||||||||||||| || | || |||| ||||| ||||| || Sbjct 86550892 TCCTTCTGGATGTTATAATCAGCCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAA 86550951 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | |||||| || | || | | |||||||| | ||| |||| | | | | | Sbjct 86550952 ATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGT-CTTGAATTTTAGCCTTAACATT 86551010 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || || | |||||| ||||| || |||| ||||| Sbjct 86551011 GTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 86551067 Query 43169 TACAAAGATTTGCATT 43184 ||||| ||||||||| Sbjct 86551068 AACAAAAATTTGCATT 86551083 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||||||||| ||||| || || || ||| | || || | ||||| || || || Sbjct 85489379 CTCCTTTTGAATATTATAATCTGCGAGTGTACGCCCATCTTCCAATTGCTTCCCTGCAAA 85489320 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||| || | |||||| || | || | | |||||||| | ||| |||| | || | Sbjct 85489319 TATCAGCCTCTGCTGATCCGGTGGAATACCCTCCTTGT-CTTGAATTTTCGCCTTAACAT 85489261 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || | ||||||||||| || |||| || || | Sbjct 85489260 TATCTATCGTGTCTGAGTTTTCAACTTCCAGTGTGATGGTTTTTCCAGTTAAGGTTTTAA 85489201 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 85489200 CAAAGATCTGCAT 85489188 >seq1591 Length=249109 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | | || |||||| ||||| ||| |||||||||||| ||||| || || Sbjct 29263 TCCTCCCCTCAGCCTCAGCACCAAGTGCAAGGTGGACTCCTTTTGAATGTTGTAGTCTGC 29204 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || | |||||| || || || || || | ||||||||| | || Sbjct 29203 AAGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGG 29144 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | |||||||||| ||| || |||| ||| | | | ||||| ||| | Sbjct 29143 AATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCAGAACTTTCAA 29085 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 29084 CCTCCAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 29036 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||| || || || | || || |||||||| |||||||| Sbjct 28998 TCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 28939 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | | ||||||||| | || | || |||||| ||| ||| |||| | |||| | Sbjct 28938 ATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCC-TGAATTTTGGCCTTGACATT 28880 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| ||| || || || | |||||||| ||||| || || || || Sbjct 28879 GTCGATGGTGTCAGAACTC---TCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTT 28823 Query 43169 TACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 28822 GACGAAGATCTGCAT 28808 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || |||||||| ||||||| |||| | || || |||||||| ||||| || Sbjct 29455 CTCTTTCTGGATATTGTAGTCAGCCAAGGTCCTTCCATCCTCGAGCTGCTTCCCAGCAAA 29396 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | | |||||||||| ||| || ||| | | Sbjct 29395 GATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTAGCTTTTACATT 29336 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | ||||||||||| || || | ||||| Sbjct 29335 GTCGATGGTGTCAGAGCTC---TCCACCTCCAAGGTGATGGTTTTCCCAGTCAATGTCTT 29279 Query 43169 TACAAAGATTTGCATT 43184 || ||||| |||||| Sbjct 29278 CACGAAGATCTGCATT 29263 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || ||||||||||| || || || || |||| || |||||||| || ||||| Sbjct 28543 CTCCTTCTGGATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAA 28484 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||| || | || | | || |||||| |||||| ||| | ||| Sbjct 28483 GATAAGCCTTTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGGATTTTGGCTTTTA-CGT 28425 Query 43112 CG-CCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| || || || | |||||||| || || ||||| || | Sbjct 28424 TGTCGATTGTGTCGGAACTC---TCGACCTCAAGAGTGATGGTCTTTCCGGTTAGGGTTT 28368 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 28367 TCACGAAGATCTGCAT 28352 >seq8 Length=47755514 Score = 100 bits (110), Expect = 3e-16 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| |||||| ||||||||||||||||| | ||||| | Sbjct 5427077 ACGGAGCACCAAATGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCTAAAGTCCTTCC 5427136 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||| |||||||| || || | | |||||| || | || | | |||||| Sbjct 5427137 ATCTTCCAACTGTTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTT 5427196 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 |||| ||| | || | |||| ||| | | | |||||| ||| || || | ||| Sbjct 5427197 GTCC-TGAATCTTAGCCTTGA-CGTTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTG 5427254 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || | |||||| ||||| || ||||| Sbjct 5427255 ATTGTTTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 5427292 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/221 (69%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| | ||||| || |||||| ||||| ||||||||||| ||||| || | Sbjct 5426849 ACGAAGCACAAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGACC 5426908 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | |||||||||||| || || || | ||||| || | || | | |||||| Sbjct 5426909 ATCTTCCAACTGCTTACCAGCAAAGATCAGCCTTTGCTGATCTGGTGGGATACCCTCCTT 5426968 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTC---GCTCGATTCCACATCGACCG 43143 ||| ||| || || | ||| | | | || || ||| ||| || || | | Sbjct 5426969 ATCCTGGATCTTAGCCTTAA-CGTTGTCGATAGTATCTGAGCT---TTCAACCTCAAGAG 5427024 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||||||||| || || | ||||| ||||| || |||||| Sbjct 5427025 TGATGGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCATT 5427065 >seq1629 Length=244661 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || |||||||| |||||||| | || |||||| || || || || || || Sbjct 134827 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGCA 134768 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| |||| || | ||| |||||||| || || | ||||||||||| | ||| Sbjct 134767 AGAGTCCTGCCGTCCTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 134708 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGA 43107 | | ||||||||| ||| ||| ||||| Sbjct 134707 ATACCCTCCTTGTCTTGGATCTTTGCTTTGA 134677 >seq116 Length=957605 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131 || ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 757760 GCCGGGGATCGAACCCGGGTCTCCCGCGTGACAGGCGGGAATACTCACCACTATACTAC 757702 >seq6 Length=97571839 Score = 84.2 bits (92), Expect = 2e-11 Identities = 162/235 (69%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||||||||| | ||| | |||| ||||||||||||||||||||||| Sbjct 19666998 CCTCCGCAAAGACGCAACACAAGATGGAGTGTGGATTCCTTTTGAATATTGTAATCAGCA 19666939 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || || || || ||||| || || | | || ||||| | || Sbjct 19666938 AGTGTTCGACCATCTTCCAGTTGTTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGA 19666879 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||||||| | ||| | ||||||| | | | | | | ||||| |||| || Sbjct 19666878 ATTCCTTCCTTGT-CTTGAATCTTTGTTTTAACATTGTCAATGGTGTCTGAGCTC---TC 19666823 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTC----TTTACAAAGATTTGCAT 43183 || || | || ||||| || || || || ||| || || ||||||||||| Sbjct 19666822 AACCTCCAGTGTTATGGTCTTTCCAGTAAGGGTCTTAATTAACGAAGATTTGCAT 19666768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571551747702320