Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 1e-13 >seq7 Length=114765206 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| || || ||| || || || ||||| |||||||| ||||| ||||||||| Sbjct 108616682 CAGTTTTATGTAGCCAATGGGGAGTTATCCTGTCAGATGTATCAGCGATCTGCTGATATG 108616623 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || ||||| || || || || |||||| |||||| |||| || | ||||| || ||| Sbjct 108616622 GGTCTGGGAGTGCCATTTAACATTGCATCTTATGCCTTGCTGACATGCATGATAGCTCAT 108616563 Query 20551 GTT 20553 ||| Sbjct 108616562 GTT 108616560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399003049144330