Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq6 107 1e-18 seq1629 102 6e-17 seq1 102 6e-17 seq854 100 2e-16 seq12 93.3 3e-14 seq8 93.3 3e-14 seq1591 91.5 1e-13 seq1898 87.8 1e-12 >seq6 Length=97571839 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || ||||| || || || ||||| ||||| | || ||| | ||| Sbjct 19649544 AACACAAGATGGAGAGTGGATTCCTTCTGAATGTTATAATCAGTCAGTGTTCGACCATCT 19649485 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| ||||| | || || | |||||| || ||||||||||||||||| Sbjct 19649484 TCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGAATTCCTTCTTTGTCT 19649425 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 |||||| | || ||| | || ||||| || | | || || || | |||||||| Sbjct 19649424 TGAATTTTTGTTTTAACATTGTCAATGGTGTCACAGCTCTCAACCTCAAGTGTAATGGTC 19649365 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || || || ||||| |||||||| Sbjct 19649364 TTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 19649333 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || ||||| || ||||| || |||||||| || ||| | ||| Sbjct 19666983 AACACAAGATGGAGTGTGGATTCCTTTTGAATATTGTAATCAGCAAGTGTTCGACCATCT 19666924 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| ||||| | ||||| | ||||||||| ||||||||||| ||||| Sbjct 19666923 TCCAGTTGTTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCT 19666864 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| || | || ||| | || ||||| || | || || || | || ||||| Sbjct 19666863 TGAATCTTTGTTTTAACATTGTCAATGGTGTCTGAGCTCTCAACCTCCAGTGTTATGGTC 19666804 Query 15332 TTACCTGTCAGAGT----TTTTACAAAAATTTGCATATTTGAAA 15371 || || || || || || || || |||||||||| || || Sbjct 19666803 TTTCCAGTAAGGGTCTTAATTAACGAAGATTTGCATATCTGTAA 19666760 >seq1629 Length=244661 Score = 102 bits (112), Expect = 6e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || |||||||| || ||| |||| | ||||| | ||| Sbjct 134347 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTACCATCTTCAAGTTGC 134288 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 |||||||| | ||||| | |||||| || ||||| || || || || || ||| Sbjct 134287 TTGCCAGCAAAAATCAACCTTTGTTGATCAGGAGGAATACCCTCCTTATCCTGGATCTTT 134228 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 || ||| ||| | || ||||| || | || || || | ||||| || || || || Sbjct 134227 GC-CTTGACATTGTCAATGGTGTCTGAGCTCTCGACCTCAAGAGTAATAGTCTTTCCGGT 134169 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 ||||||||| ||||| ||||||||| Sbjct 134168 CAGAGTTTTAACAAAGATTTGCATA 134144 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||| | | | ||| | || ||||| || ||||| || ||||||||||| Sbjct 134601 TGCCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGACTCTTTCTGAATGTTGTAATCTG 134542 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | ||| |||| || | ||| || || || | |||| | || ||||| | Sbjct 134541 CCAATGTCCTCCCGTCCTCAAGTTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGAG 134482 Query 15255 GAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 |||| ||||| ||||| || |||||| || ||| | || |||||||| | |||| Sbjct 134481 GAATACCTTCCTTGTCTTGGATCTTTGCT-TTAACATTGTCGATGGTATCTGAACTTTCA 134423 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || | ||| || || || || || || || || ||||| || ||||| Sbjct 134422 ACTTCAAGGGTGATTGTCTTGCCGGTAAGCGTCTTGACAAAGATCTGCAT 134373 >seq1 Length=110538649 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| || |||||||| | ||| | ||||||||||| || || || ||||| ||||| Sbjct 85489872 TGCCGCCCCTCAATCTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAG 85489813 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| ||| | ||||||||||| || ||||| | |||| | || ||||| | Sbjct 85489812 CCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGACG 85489753 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || ||||| || || ||||| ||| ||| | || || || || | || | Sbjct 85489752 GGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCCGAGCTCTCAA 85489693 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | ||||| ||||||||||| || || | ||||| | ||| |||||||| Sbjct 85489692 CTTCTAATGTAATGGTTTTCCCGGTTAAGGTTTTAATAAAGATTTGCAT 85489644 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| ||||| || | ||| | ||||||||||| || || || ||||| ||||| Sbjct 86550854 TGCCACCCCTCAACCTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAG 86550913 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| ||| | ||||||||||| || ||||| | |||| | || || || || Sbjct 86550914 CCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTG 86550973 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || || || ||||| |||||| ||| ||| | ||||| || || | || | Sbjct 86550974 GGATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTGTCTATCGTGTCCGAGCTCTCAA 86551033 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || || || || ||||| || || | || || |||||||||||||| Sbjct 86551034 CTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCAT 86551082 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| |||| || | || | ||| || ||||| || || || || ||||| || Sbjct 14110190 CCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 14110131 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || | ||| || |||||| | ||||| | || || || ||| Sbjct 14110130 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGA 14110071 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || ||||| ||| || ||| | || || |||||| | | || || Sbjct 14110070 ATGCCTTCTTTATCCTGGATTTTAGCT-TTGACATTGTCAATTGTATCGGAACTCTCAAC 14110012 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | |||||| || || ||||||| |||||||||||| || |||||| Sbjct 14110011 CTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCATA 14109963 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || ||||| || |||||||| ||| | | | | || || | ||| Sbjct 85489618 TGGAGTGTTGACTCCTTTTGAATATTGTAATCCGCGAGAGTACGCCCATCCTCGAGCTGT 85489559 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | |||||||||||||| || |||||| ||||| || || |||||| Sbjct 85489558 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTTTG 85489499 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || || || |||| || || || || || ||||| || ||| Sbjct 85489498 GCCTTAACATTATCAATCGTGTCCGAGCTTTCGACTTCCAATGTGATTGTTTTTCCAGTC 85489439 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | ||||| ||||||| |||||| Sbjct 85489438 AAGGTTTTAACAAAAACTTGCAT 85489416 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 |||| || || || || || ||||| ||||| ||||| |||| |||| | |||||| Sbjct 86550648 ACTAGGTGGAGTGTCGACTCCTTTTGAATGTTATAATCAGCTAGAGTTCTTCCATCTTCT 86550707 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| || || | ||||| | ||| ||||| ||| || || || || | Sbjct 86550708 AATTGTTTCCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGGATACCCTCCTTATACTGT 86550767 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || ||||||||| | | || || || || || || || || Sbjct 86550768 ATCTTGGCCTTCACATTATCAATGGTATCGGAACTCTCCACCTCCAACGTGATCGTCTTC 86550827 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||| ||| || ||||| || ||||| Sbjct 86550828 CCCGTC--AGTCTTCACAAAGATCTGCAT 86550854 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || ||||| || || ||||| || ||||| || ||| ||| | | || ||||| || Sbjct 14109710 TGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCAAGAGTTCGCCCATCCTCTAACTGC 14109651 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 || ||||| | ||||| | ||| || || ||||||||||| || || || ||| Sbjct 14109650 TTTCCAGCAAAGATCAACCTTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTTT 14109591 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 || ||| ||| | || || || || | | || || || | || |||||||| || || Sbjct 14109590 GC-CTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGAGTGATGGTTTTGCCAGT 14109532 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| |||||||| Sbjct 14109531 GAGGGTCTTTACAAAGATTTGCAT 14109508 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| |||| | | || ||||| ||||| || || || || ||||||||||| | Sbjct 14110418 CCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGCT 14110359 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | || | || || | || || ||||| | || | | || ||||| |||| Sbjct 14110358 AAAGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGA 14110299 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || |||||| ||| ||| | || ||||| || | || || Sbjct 14110298 ATCCCTTCCTTATCTTGAATTTTTGCCTTCACATTGTCGATGGTGTCCGAGCTCTCAACT 14110239 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| ||||| || |||| ||||| ||||| ||||||||| Sbjct 14110238 TCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCATA 14110191 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || ||||| ||||| ||||| ||| | | | || || | |||| Sbjct 86551336 TGGAGAGTTGACTCCTTTTGAATGTTATAATCAGCGAGAGTCCGTCCATCCTCAAGTTGT 86551395 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279 || || || | |||||||||||||| || |||||| ||||||||||| ||||| Sbjct 86551396 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTC 86551455 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || ||| | || || | || | | || || || | || || || || || || Sbjct 86551456 GCT-TTAACATTGTCGATCATGTCTGAACTCTCAACTTCGAGAGTTATAGTCTTGCCAGT 86551514 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 ||||| |||||||| || ||||| Sbjct 86551515 AAGAGTCTTTACAAAGATCTGCAT 86551538 >seq854 Length=364260 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || ||||| |||||||| || ||| | | | || |||| || Sbjct 69243 TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCCTCTAGCTGC 69184 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | || || ||| ||||||||||| ||||| ||| || Sbjct 69183 TTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTA 69124 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || || ||| | | || || || | ||||||||||| || || Sbjct 69123 GCCTTGACATTATCAATAGTGTCGGAACTCTCAACCTCGAGAGTAATGGTTTTTCCGGTG 69064 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| |||||||| Sbjct 69063 AGTGTCTTTACAAAGATTTGCAT 69041 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| ||||| || || ||||| ||| ||| | | | | || || | || Sbjct 69471 TGAAGGGTGGACTCTTTCTGAATATTGTAGTCGGCAAGAGTGCGCCCATCCTCAAGCTGC 69412 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | || ||||| || || ||||| ||||| || || Sbjct 69411 TTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTC 69352 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| ||| | || || || | ||| ||||| || || ||| Sbjct 69351 GACTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCGGTC 69292 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | |||||||||||||| ||||| Sbjct 69291 AATGTTTTTACAAAAATCTGCAT 69269 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || |||||||| ||| ||| | | | | || || | || Sbjct 69699 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGCCCATCCTCAAGCTGC 69640 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | || || || || || ||||||||||| || || Sbjct 69639 TTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATGCCTTCTTTGTCCTGGATCTTC 69580 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| ||| | || || || | ||| ||||| || || ||| Sbjct 69579 GCCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGTC 69520 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | |||||| |||||||| ||||| Sbjct 69519 AAAGTTTTCACAAAAATCTGCAT 69497 >seq12 Length=53491057 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || |||||||| || || || |||||||| || ||| ||| | || || | || Sbjct 49993693 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTGC 49993752 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || ||| | ||||| || |||||||| |||||| ||||| || || ||| || Sbjct 49993753 TTTCCTGCGAAAATCAACCGCTGTTGGTCCGGTGGAATGCCTTCCTTATCCTGAATCTTA 49993812 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTT-TCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| ||| | || ||||| || | || ||||| ||||||||||| || || || || Sbjct 49993813 GCCTTAACATTGTCAATGGTGTC-CGATGACTCTACCTCTAAGGTAATAGTCTTCCCCGT 49993871 Query 15340 CAGAGTTTTTACAAAAATTTGCATATTT 15367 ||| || || || || || ||||| ||| Sbjct 49993872 CAGGGTCTTCACGAATATCTGCATCTTT 49993899 >seq8 Length=47755514 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || |||||||||||||| || || || || |||||||| || | | || | ||||| Sbjct 5427084 ACCAAATGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCTAAAGTCCTTCCATCTTCC 5427143 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || ||||| ||||| | ||||| | || || || ||| ||||| || ||||| | Sbjct 5427144 AACTGTTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGA 5427203 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || || || ||| |||| || || | ||| || ||||| Sbjct 5427204 ATCTTAGCCTTGACGTTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTC 5427263 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| || || |||||||| ||||| Sbjct 5427264 CCGGTCAACGTCTTCACAAAAATCTGCAT 5427292 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || ||||||||||| ||| |||| ||||||| Sbjct 5427312 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTGCCGTCTTCG 5427371 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || || || | ||||| | || ||||| ||| |||||||| || || | Sbjct 5427372 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCCTTATCCTGA 5427431 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || || || ||| |||| || || | ||| || ||||| Sbjct 5427432 ATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATTGTTTTC 5427491 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| || || || |||||| Sbjct 5427492 CCAGTTAGGGTTTTGACGAAGATCTGCATA 5427521 >seq1591 Length=249109 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || || || || |||||||||||| || | | | || || | || Sbjct 28782 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCGAGGGTACGGCCATCCTCGAGCTGC 28723 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| ||| | ||||| | || ||||| ||||||||| || || || ||||||| Sbjct 28722 TTGCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTATCCTGAATTTTG 28663 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| || | |||| || || | ||| || ||||| || || Sbjct 28662 GCCTTGACATTATCGATGGTGTCAGAACTTTCGACCTCAAGGGTGATTGTTTTGCCGGTG 28603 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || || || ||||| Sbjct 28602 AGGGTTTTGACGAAGATCTGCAT 28580 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||||||||| || || || || ||||||||||| ||| | | | || || | || Sbjct 29011 ATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTG 28952 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||||||||| | ||||| | || ||||| ||||| || || || || |||||| Sbjct 28951 CTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGAATTTT 28892 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| | || ||||| || | | || || || | ||| ||||| || ||||| Sbjct 28891 GGCCTTGACATTGTCGATGGTGTCAGAACTCTCGACCTCAAGGGTGATGGTCTTGCCTGT 28832 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || || || |||||| Sbjct 28831 GAGGGTTTTGACGAAGATCTGCATA 28807 >seq1898 Length=217218 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||||||||| || || || || || |||||||| || | || | || || Sbjct 78623 ACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGCAAGGGTCCTTCCATCCTCG 78564 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||| ||||| ||||||| | || ||||| ||||| || || ||||| Sbjct 78563 AGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGG 78504 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||||| ||||||| | || | |||||| | || || || | ||| || || || Sbjct 78503 ATCTTTGC-CTTTACATTGTCGACGGTATCTGAGCTCTCAACTTCAAGGGTGATCGTCTT 78445 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || | |||||| |||||||| ||||| Sbjct 78444 GCCCGTTAAAGTTTTAACAAAAATCTGCAT 78415 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || ||||| || || ||||| || |||||||| ||| ||| | ||||| | || Sbjct 78389 TGGAGGGTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGC 78330 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | |||| | || ||||| ||||| ||||| ||||| ||||||| Sbjct 78329 TTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTG 78270 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || || || || | | || || || | ||||||||||| || || Sbjct 78269 GCCTTCACGTTATCAATTGTGTCTGAACTCTCAACCTCGAGAGTAATGGTTTTCCCAGTG 78210 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| || ||||| Sbjct 78209 AGTGTCTTTACAAAGATCTGCAT 78187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362015023489554