Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 143 6e-29 seq854 132 1e-25 seq1898 127 5e-24 seq1591 125 2e-23 seq12 122 2e-22 seq241 120 7e-22 seq8 113 1e-19 seq3 100 7e-16 seq2165 89.7 1e-12 seq6 89.7 1e-12 seq1629 87.8 4e-12 seq4685 86.0 1e-11 seq898 84.2 5e-11 >seq1 Length=110538649 Score = 143 bits (158), Expect = 6e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || || || | || || ||||| || ||||| || || Sbjct 86551311 TCCACCACGTAGACGAAGAACAAGGTGGAGAGTTGACTCCTTTTGAATGTTATAATCAGC 86551370 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || ||||| || || | |||||||||||| ||||||| ||| |||||| ||| Sbjct 86551371 GAGAGTCCGTCCATCCTCAAGTTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGG 86551430 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT-- 288423 || |||||||| ||||||||||||||||| || || || || || || | ||| Sbjct 86551431 AATACCTTCTTTGTCCTGGATTTTCGCTTTAACATTGTCGAT--CATGTCTGAACTCTCA 86551488 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || || |||||||| || || |||||||| Sbjct 86551489 ACTTCGAGAGTTATAGTCTTGCCAGTAAGAGTCTTTACAAAGATCTGCAT 86551538 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || || || ||||| || || ||||| Sbjct 83615663 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 83615722 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || ||||| ||||| ||||||||||| || ||||||| Sbjct 83615723 AGGGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTG---ATCTGGG 83615779 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| ||||| ||||| || |||||||| || || || | ||| ||||| Sbjct 83615780 GGAATCCCTTCCTTATCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCA 83615839 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || || || || || ||||| |||||||| Sbjct 83615840 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 83615889 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || || || || || |||| ||| ||| ||||| |||||||| || || Sbjct 85490099 TCCACCCCTTAGCCTGAGAACAAGGTGAAGGGTGGATTCCTTTTGAATATTATAATCTGC 85490040 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| ||||| |||||||| ||||| || ||||| | ||| || ||| Sbjct 85490039 AAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGG 85489980 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| || || |||||||| || || || ||||| || || || | ||| ||| || Sbjct 85489979 GATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTC---TC 85489923 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||||||| |||| ||||| || || |||||||| Sbjct 85489922 CACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTGCAT 85489872 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || ||||| | ||| ||| || || ||||| ||||| || Sbjct 14110190 CCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 14110131 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| ||||| |||||||||| | ||| ||| ||||| Sbjct 14110130 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGA---TCTGGA 14110074 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || |||||||||||||||||||| ||||| || || || || | |||| ||| Sbjct 14110073 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTC--- 14110017 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || |||| ||| || || || |||||||| Sbjct 14110016 TCAACCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 14109964 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| || |||||| || || ||||| || || Sbjct 14110874 CCACCACGGAGACGAAGAACCAGGTGAAGAGTTGATTCTTTCTGAATGTTATAATCAGCA 14110815 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || || ||||| | ||| || ||| Sbjct 14110814 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGA 14110755 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || |||||||| || || || ||||| || || || | ||| |||| || Sbjct 14110754 ATACCCTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCCGAGCTC---TCA 14110698 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| |||| |||||| || || |||||||| Sbjct 14110697 ACCTCCAGGGTGATCGTCTTCCCAGTCAAAGTCTTAACAAAAATCTGCAT 14110648 Score = 109 bits (120), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || || || | || || ||||| || ||||| || || Sbjct 86550629 TCCACCACGAAGGCGAAGGACTAGGTGGAGTGTCGACTCCTTTTGAATGTTATAATCAGC 86550688 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| |||||||||||||| ||||| || |||| | || || ||| Sbjct 86550689 TAGAGTTCTTCCATCTTCTAATTGTTTCCCTGCAAAAATCAATCTTTGCTGGTCTGGTGG 86550748 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| || || |||| ||| || || || ||||| || || || | |||| ||| || Sbjct 86550749 GATACCCTCCTTATACTGTATCTTGGCCTTCACATTATCAATGGTATCGGAACTC---TC 86550805 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||||||| ||| |||||| || || |||||||| Sbjct 86550806 CACCTCCAACGTGATCGTCTTCCCCGTC--AGTCTTCACAAAGATCTGCAT 86550854 Score = 104 bits (114), Expect = 6e-17 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || || || | || || ||||| ||||| || || || Sbjct 85489643 TCCACCACGGAGACGAAGAACAAGGTGGAGTGTTGACTCCTTTTGAATATTGTAATCCGC 85489584 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || || || || | ||||||||||| ||||||| ||| |||||| ||| Sbjct 85489583 GAGAGTACGCCCATCCTCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGG 85489524 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || ||||| ||||| |||||||| || || || || || || | || ||| ||| Sbjct 85489523 AATACCTTCCTTATCTTGGATTTTGGCCTTAACATTATCAATCGTGTCCGAGCT---TTC 85489467 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| || || || |||| || || || || | |||||| Sbjct 85489466 GACTTCCAATGTGATTGTTTTTCCAGTCAAGGTTTTAACAAAAACTTGCATT 85489415 Score = 104 bits (114), Expect = 6e-17 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || || |||| ||| ||| || ||||| ||||| || || || || ||||| Sbjct 86550868 CTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAGAGTTCGTCCA 86550927 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 ||||||||||| || || || || ||||| | ||| ||| |||||| || || || Sbjct 86550928 TCTTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTG 86550987 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTG 288435 || || ||||| || || || || ||||| | || |||| || ||||| | |||| Sbjct 86550988 TCTTGAATTTTAGCCTTAACATTGTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTG 86551044 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || | ||||| || || || |||||| Sbjct 86551045 ATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCATT 86551083 Score = 102 bits (112), Expect = 2e-16 Identities = 158/223 (71%), Gaps = 12/223 (5%) Strand=Plus/Minus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| || || || |||| ||| ||| || ||||| ||||| || || || || ||||| Sbjct 85489859 TCTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAGAGTTCGTCC 85489800 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTG---GGATTCCTTC 288374 ||||||||||| || || || || ||||| | ||| || |||| |||| ||||| Sbjct 85489799 ATCTTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGG---TCTGACGGGATACCTTC 85489743 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAG 288431 ||||| ||||||||||| || || || || || | || |||| || ||||| | Sbjct 85489742 CTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCCGAGCTC---TCAACTTCTAA 85489686 Query 288432 CGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || |||||||| | || || | || || |||||| Sbjct 85489685 TGTAATGGTTTTCCCGGTTAAGGTTTTAATAAAGATTTGCATT 85489643 Score = 100 bits (110), Expect = 7e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || || || ||||| || || || || | ||||||||||| || ||| Sbjct 21288124 CCTTCTTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCGCTCGATTCAACCTCG 21288065 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 |||||||| ||||||||||| || || || ||||| ||||||||| || Sbjct 21288064 AGCGTGATTGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATTTTG 21288017 Score = 98.7 bits (108), Expect = 2e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || ||||||||||| ||||| || Sbjct 14109734 CCACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCA 14109675 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || || ||||| || ||||| || ||||||| || || ||| |||| Sbjct 14109674 AGAGTTCGCCCATCCTCTAACTGCTTTCCAGCAAAGATCA-AC-CT-TTGCTGATCTGGA 14109618 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| ||||| ||||| || || || || || || |||| | || | ||| Sbjct 14109617 GGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCAATAG--TGTCTGAACTCT 14109560 Query 288424 --ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| || || || || || ||||| || || || ||||| Sbjct 14109559 CAACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 14109508 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| ||||| || || || || | ||||| || | || || ||||| || Sbjct 14110610 TCTTTCTGGATGTTATAATCAGCAAGAGTCCTCCCGTCCTCAAGCTGCTTCCCTGCAAAA 14110551 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || | |||||||||||| || || || ||||| || ||||| || Sbjct 14110550 ATCAACCTCTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGAATTTTAGCCTTCACATTG 14110491 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || ||||| || ||||| || ||||| |||| ||||| Sbjct 14110490 TCGATGGTGTCCGAGCTC---TCAACTTCAAGGGTGATAGTTTTCCCTGTCAATGTCTTC 14110434 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 14110433 ACAAAGATCTGCAT 14110420 >seq854 Length=364260 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| ||||| |||| ||| |||||| ||||| ||||| || || Sbjct 70407 CCACCACGGAGACGAAGCACGAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCTGCA 70348 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || || ||||| | || ||| ||| Sbjct 70347 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGATCTGGTGGA 70288 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || |||||||||||||| || |||| ||| |||| || Sbjct 70287 ATACCCTCCTTGTCCTGAATCTTCGCTTTCACGTTATCAATAGTATCAGAGCTC---TCC 70231 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct 70230 ACCTCCAAAGTGATGGTCTTCCCAGTTAGAGTCTTGACAAATATTTGCAT 70181 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || || || | ||| || ||||| ||||| ||||| || Sbjct 69951 CCACCCCTCAGCCGAAGAACAAGGTGGAGGGTGGACTCCTTTTGAATATTGTAGTCAGCA 69892 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| || || | || ||||| || || |||| | ||| || ||| Sbjct 69891 AGAGTCCGTCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGAGGG 69832 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| ||||| || || || || || | || |||| || Sbjct 69831 ATGCCTTCCTTATCCTGGATCTTCGCCTTAACATTGTCAATGGTGTCGGAGCTC---TCA 69775 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| |||||||| |||| |||||| ||||| |||||||| Sbjct 69774 ACTTCAAGGGTGATGGTCTTCCCAGTCAAAGTCTTAACGAAAATCTGCAT 69725 Score = 104 bits (114), Expect = 6e-17 Identities = 168/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || || |||| ||| ||||| || ||||| |||| Sbjct 69499 CATG-CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTGTAGT 69441 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || ||||| || || || | || ||||| || || |||| | ||| || | Sbjct 69440 CGGCAAGAGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGG---T 69384 Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---C 288415 |||| ||| ||||| || |||||||| |||| || || || || || | ||| | Sbjct 69383 CTGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTAACATTGTCAATGGTGTCGGAGC 69324 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||||||||||| || || || || |||||||| Sbjct 69323 TC---TCAACCTCAAGGGTGATGGTCTTCCCGGTCAATGTTTTTACAAAAATCTGCAT 69269 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||||||||| || || || || | || || || | || || || || ||| Sbjct 70143 TCTTTCTGGATATTATAATCAGCAAGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAG 70084 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| ||||| ||| ||||| || ||||||||||| ||||| ||||| || || Sbjct 70083 ATCAATCGCTGCTGA---TCTGGCGGAATCCCTTCTTTATCTTGGATCTTCGCCTTTACA 70027 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || || | ||||| |||||||| ||||| ||||| Sbjct 70026 TTATCAATTGTATCAGAACTTTCAACCTCCAAGGTGATTGTCTTCCCTGTCAGTGTCTTC 69967 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 69966 ACAAAGATCTGCAT 69953 >seq1898 Length=217218 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | ||| ||| ||||||||||| || || || Sbjct 79097 CCACCACGAAGGCGAAGCACAAGGTGGAGTGTGGATTCCTTTTGGATATTGTAATCTGCA 79038 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || || || || | ||| ||| |||| Sbjct 79037 AGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTCTGCTGATCTGGTGGG 78978 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || |||||||||||||| ||||| || || ||||| || |||| || |||| || Sbjct 78977 ATCCCTTCTTTATCCTGAATTTTGGCCTTGACGTTGTCAATAGTGTCAGAGCTC---TCC 78921 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| || |||| ||| ||||| ||||||||||| Sbjct 78920 ACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAATATCTGCAT 78871 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| || || || || || ||||| || || || || | ||| ||||| Sbjct 78851 ACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCAAGTGTCCTTCCATCTTCA 78792 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCC 288381 | ||| || ||||| || |||| ||||| || |||||| || ||||| || || Sbjct 78791 AGTTGCTTCCCTGCAAATATCAACCGCTGCTGG---TCTGGGGGAATCCCTTCCTTGTCT 78735 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCG 288439 || ||||| || |||||||| || || | || | | ||| || || | ||||| | Sbjct 78734 TGAATTTTGGCCTTCACGTTATCAATTGTGTC--TGAACTCTCAACCTCCAAGGTGATAG 78677 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || |||| |||||||||||| || ||||| Sbjct 78676 TTTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 78643 >seq1591 Length=249109 Score = 125 bits (138), Expect = 2e-23 Identities = 169/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| || || || |||||||| || |||||| Sbjct 28578 CCACCTCGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGCG 28519 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || | || ||| |||||| Sbjct 28518 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGA---TCTGGG 28462 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 ||||||||||| ||||||||||| ||||| ||||| || || | ||| ||| Sbjct 28461 GGAATTCCTTCTTTGTCCTGGATTTTGGCTTTTACGTTGTCGATTGTGTCGGAACTC--- 28405 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| ||||| || || || ||||| |||||||| Sbjct 28404 TCGACCTCAAGAGTGATGGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 28352 >seq12 Length=53491057 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | ||| || || ||||| || ||||| || Sbjct 49993669 CCACCACGGAGGCGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 49993728 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||||||||| |||| |||||||| ||| Sbjct 49993729 AGTGTTCGGCCATCCTCAAGCTGCTTTCCTGCGAAAATCAACCGCTGTTGGTCCGGTGGA 49993788 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| |||||||| || || || || || || || || | || || ||||| Sbjct 49993789 ATGCCTTCCTTATCCTGAATCTTAGCCTTAACATTGTCAATGGTGTCCGATGACTCTACC 49993848 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || |||||||| ||||| ||||| |||||||||||||| Sbjct 49993849 TCTAAGGTAATAGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 49993895 >seq241 Length=672200 Score = 120 bits (132), Expect = 7e-22 Identities = 149/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || || || ||||| || || ||||| Sbjct 541855 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 541796 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | |||||||| | || ||||| ||||| |||||||||||||| ||||||| Sbjct 541795 AGGGTACAGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGTTG---ATCTGGG 541739 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| ||||| ||||| || |||||||| || || || | ||| ||||| Sbjct 541738 GGAATCCCTTCCTTATCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCA 541679 Query 288424 ACTTCGAGCGTGATCGTCTTCCC 288446 || || || ||||| || || || Sbjct 541678 ACCTCAAGGGTGATTGTTTTACC 541656 >seq8 Length=47755514 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| ||| || | |||| || || || ||||| || || || || Sbjct 5427294 CCACCACGAAGTCGAAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCT 5427353 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | |||||||| | || ||||| || ||||||| | ||| || |||| Sbjct 5427354 AGGGTTCTGCCGTCTTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 5427413 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||| || || || || ||||| || |||| ||| ||| || Sbjct 5427414 ATTCCTTCCTTATCCTGAATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACC 5427473 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||| || || || |||||||| |||||||| Sbjct 5427474 TCAAGGGTGATTGTTTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 5427520 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || || | |||||||| | || ||||| |||||| Sbjct 5427558 TCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCTTCGAGCTGCTTTCCGGCGAAG 5427617 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || ||||||||||| |||||||| || || || || ||||| Sbjct 5427618 ATCAACCTCTGCTGGTCCGGCGGGATTCCTTCCTTATCCTGAATCTTAGCCTTGACGTTG 5427677 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || || |||||||| || || || || |||||| Sbjct 5427678 TCAATTGTGTCGGAGCTTTCAACCTCAAGGGTTATCGTCTTTCCAGTTAGGGTTTTGACG 5427737 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 5427738 AAGATCTGCAT 5427748 Score = 107 bits (118), Expect = 5e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || || || || || || || || Sbjct 5426838 CCACCACGAAGACGAAGCACAAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGCA 5426897 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| || || || || || |||||||| | || ||| |||| Sbjct 5426898 AGAGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAGCCTTTGCTGATCTGGTGGG 5426957 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||||||||| || || || ||||| || |||| ||| ||| ||| Sbjct 5426958 ATACCCTCCTTATCCTGGATCTTAGCCTTAACGTTGTCGATAGTATCTGAGCT---TTCA 5427014 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| || ||||| |||| |||||| || || ||||||||| Sbjct 5427015 ACCTCAAGAGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCATT 5427065 >seq3 Length=72893213 Score = 100 bits (110), Expect = 7e-16 Identities = 146/204 (72%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || || || ||||| || || ||||| Sbjct 72826982 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 72826923 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | || |||| | ||| ||||||||||| || ||||||| Sbjct 72826922 AGGGTACGGCCATCTTCAAGCTGCTTTCTGGTGAAAATCAGACGCTGCTG---ATCTGGG 72826866 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-GCTCGATTC 288422 || ||||| ||||| ||||| || |||||||| || || || | || | ||||| Sbjct 72826865 GGAATCCCTTCCTTATCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCTGGAAGATTC 72826806 Query 288423 TACTTCGAGCGTGATCGTCTTCCC 288446 || || || ||||| || || || Sbjct 72826805 AACCTCAAGGGTGATTGTTTTACC 72826782 >seq2165 Length=195897 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || ||||| || || || || || || || || | |||||||||||| ||||| Sbjct 69925 CCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTATCGCTCGATTCCACTTCA 69866 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||| || || || || ||||| |||||||| Sbjct 69865 AGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 69822 >seq6 Length=97571839 Score = 89.7 bits (98), Expect = 1e-12 Identities = 107/144 (74%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 ||| || || ||||||||||| | || ||| | ||||| ||||||||||| || ||| Sbjct 70163091 GGCTAGGGTACGTCCGTCTTCAAGCTGCTTTTCGGCGAAAATCAGACGCTGCTG---ATC 70163147 Query 288363 TGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419 |||| || ||||| ||||| ||||| || |||||||| || || || | ||| || Sbjct 70163148 TGGGGAAATCCCTTCCTTATCATGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGA 70163207 Query 288420 TTCTACTTCGAGCGTGATCGTCTT 288443 ||| || || || ||||| || || Sbjct 70163208 TTCAACCTCAAGGGTGATTGTTTT 70163231 >seq1629 Length=244661 Score = 87.8 bits (96), Expect = 4e-12 Identities = 162/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || || |||| ||| || || ||||| || |||| Sbjct 134375 CATG-CCACCACGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 134317 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | || ||||| | ||| || || || || |||| | |||||| | Sbjct 134316 CAGCAAGAGTTCTACCATCTTCAAGTTGCTTGCCAGCAAAAATCAACCTTTGTTGATCAG 134257 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 || || || || ||||||||||| || || || || || || || | || |||| Sbjct 134256 GAGGAATACCCTCCTTATCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCTGAGCTC- 134198 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| ||||||||||| || || || || ||||| Sbjct 134197 --TCGACCTCAAGAGTAATAGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCAT 134145 >seq4685 Length=81235 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || || || ||||| ||||| || || || || | ||| || ||||| |||||| Sbjct 55076 CCTTCCTTGTCTTGTATTTTGGCTTTAACATTGTCGATTGTATCACTGGATTCAACTTCG 55135 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || || ||||| || ||||||||||||||| Sbjct 55136 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATT 55180 >seq898 Length=353562 Score = 84.2 bits (92), Expect = 5e-11 Identities = 109/148 (74%), Gaps = 7/148 (5%) Strand=Plus/Minus Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 ||| || || || |||||||| | || |||| | ||| ||||||||||| || ||| Sbjct 212513 GGCTAGGGTACGGCCGTCTTCAAGCTGCTTTCTGGTGAAAATCAGACGCTGCTG---ATC 212457 Query 288363 TGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419 |||| || ||||| ||||| |||||||| |||||||| || || || | ||| || Sbjct 212456 TGGGGAAATCCCTTCCTTATCTTGGATTTTGGCTTTCACATTGTCGATTGTGTCGGAAGA 212397 Query 288420 TTCTACTTCGA-GCGTGATCGTCTTCCC 288446 ||| ||||| | | ||||| || || || Sbjct 212396 TTCAACTTCAAGGTGTGATTGTTTTACC 212369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179092237907532