Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2 122 9e-23 seq854 105 7e-18 seq1 105 7e-18 seq1898 104 3e-17 seq8 104 3e-17 seq1591 98.7 1e-15 seq1629 87.8 2e-12 seq6 86.0 7e-12 >seq2 Length=96359640 Score = 122 bits (134), Expect = 9e-23 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||| || || ||||||||||| || || || | Sbjct 95422849 ACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCC 95422790 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| || || ||||| ||||| | ||||||||| | ||| | || ||||| Sbjct 95422789 ATCTTCAAGCTGTTTTCCGGCGAAAATGAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTT 95422730 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| ||| || | ||| | | | |||||| ||||| || || | |||| Sbjct 95422729 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 95422671 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 |||| || ||||| || || || || ||||| ||||| ||| Sbjct 95422670 TGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTC 95422630 >seq854 Length=364260 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || ||||| | ||||||||||| |||| ||| || || ||||| |||||||| Sbjct 70179 CCTCCCCTCAAACGTAGCACCAAATGCAGTGTGGACTCTTTCTGGATATTATAATCAGCA 70120 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094 ||||||| | | || || |||||||||||||| || || | ||||||||| || Sbjct 70119 AGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATC 70067 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| || || ||||| || | || ||||||||||| ||||| || Sbjct 69231 TCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 69172 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | | |||||| |||| || | | ||||||||| ||| | || | |||| | Sbjct 69171 ATCAACCTCTGCTGATCGGGAGGAATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 69113 Query 42137 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| ||| || || |||| || |||||||| || || || ||||| Sbjct 69112 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTGAGTGTCTT 69056 Query 42194 TACAAAGATTTGCAT 42208 ||||||||||||||| Sbjct 69055 TACAAAGATTTGCAT 69041 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||||||||| ||||| |||||||| | || || |||||||| ||||| || Sbjct 69916 CTCCTTTTGAATATTGTAGTCAGCAAGAGTCCGTCCATCCTCAAGCTGCTTTCCAGCAAA 69857 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 || | | ||||||||| | || | || ||||| ||| ||| || Sbjct 69856 AATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTT 69809 >seq1 Length=110538649 Score = 105 bits (116), Expect = 7e-18 Identities = 144/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| || || ||||| ||||||| | |||| || | || || ||||| || Sbjct 85490291 CTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCGTCTTCCAATTGTTTCCCAGCAAA 85490232 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | |||||| || | ||| | || ||||||| | ||| |||| | | | | | Sbjct 85490231 AATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTGT-CTTGAATTTTGGCCTTAACAT 85490173 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | |||||| ||||| || |||| |||| Sbjct 85490172 TGTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCT 85490116 Query 42193 TTACAAAGATTTGCATT 42209 | ||||||||||||||| Sbjct 85490115 TAACAAAGATTTGCATT 85490099 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || || |||||||||||||| || | || |||| ||||| ||||| || Sbjct 86550892 TCCTTCTGGATGTTATAATCAGCCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAA 86550951 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | |||||| || | ||| | | |||||||| | ||| |||| | | | | | Sbjct 86550952 ATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGT-CTTGAATTTTAGCCTTAACATT 86551010 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| |||| || || || | |||||| ||||| || |||| ||||| Sbjct 86551011 GTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 86551067 Query 42194 TACAAAGATTTGCATT 42209 ||||| ||||||||| Sbjct 86551068 AACAAAAATTTGCATT 86551083 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||||||||| ||||| || || || ||| | || || | ||||| || || || Sbjct 85489379 CTCCTTTTGAATATTATAATCTGCGAGTGTACGCCCATCTTCCAATTGCTTCCCTGCAAA 85489320 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||| || | |||||| || | ||| | | |||||||| | ||| |||| | || | Sbjct 85489319 TATCAGCCTCTGCTGATCCGGTGGAATACCCTCCTTGT-CTTGAATTTTCGCCTTAACAT 85489261 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| || || | ||||||||||| || |||| || || | Sbjct 85489260 TATCTATCGTGTCTGAGTTTTCAACTTCCAGTGTGATGGTTTTTCCAGTTAAGGTTTTAA 85489201 Query 42196 CAAAGATTTGCAT 42208 ||||||| ||||| Sbjct 85489200 CAAAGATCTGCAT 85489188 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||| || ||||| |||| | || || | ||| || ||||| || Sbjct 86550437 CTCCTTCTGGATATTGTAGTCTGCCAGTGTCCTACCATCCTCCAACTGTTTTCCAGCAAA 86550496 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||||| || | | ||||| ||| || || || | | Sbjct 86550497 GATGAGCCTCTGCTGGTCGGGCGGAATACCTTCCTTATCCCGTATCTTCGCCTTCACATT 86550556 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| |||| || || || | ||||||||||| ||||||| || || Sbjct 86550557 GTCAATCGTGTCTGAGCTC---TCAACTTCTAATGTGATGGTTTTTCCCGTTAAGGTTTT 86550613 Query 42194 TACAAAGATTTGCATT 42209 ||||||||||||||| Sbjct 86550614 AACAAAGATTTGCATT 86550629 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | |||| ||||||||| | || ||||| || || ||||||||||| Sbjct 14110419 ACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGC 14110360 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | ||||| | || || |||||||| ||||| || || || | ||||||||| | ||| Sbjct 14110359 TAAAGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGG 14110300 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||||| | | ||| |||||| || | | | | ||||| |||| | Sbjct 14110299 AATCCCTTCCTTAT-CTTGAATTTTTGCCTTCACATTGTCGATGGTGTCCGAGCTC---T 14110244 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | || || ||||| || || | || || |||||||||||||| Sbjct 14110243 CAACTTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCAT 14110192 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||||||||| ||||| |||||||| ||| | || || | ||||| ||||| || Sbjct 86551119 CTCCTTTTGAATATTATAATCTGCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAA 86551178 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG- 42135 || || | || ||||| | ||| | | ||||| | | ||| |||| | | | || Sbjct 86551179 AATCAGCCTTTGTTGGTCCGGTGGAATACCTTCCTTAT-CTTGAATTTTCGCCTTAACGT 86551237 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | ||||| ||||| || || | |||| Sbjct 86551238 TATCAATAGTGTCCGAGCTC---TCAACTTCCAATGTGATTGTTTTTCCAGTCAATGTCT 86551294 Query 42193 TTACAAAGATTTGCATT 42209 | ||||| ||||||||| Sbjct 86551295 TAACAAATATTTGCATT 86551311 >seq1898 Length=217218 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 78378 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 78319 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || | ||||||||| | || | | ||||||| | ||| |||| | || | Sbjct 78318 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGT 78260 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| || || |||| || |||||||| || || || |||| Sbjct 78259 TATCAATTGTGTCTGAACTC---TCAACCTCGAGAGTAATGGTTTTCCCAGTGAGTGTCT 78203 Query 42193 TTACAAAGATTTGCAT 42208 |||||||||| ||||| Sbjct 78202 TTACAAAGATCTGCAT 78187 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/196 (73%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| ||||||||||| || || || ||| | || || |||||||||||||| ||| Sbjct 79061 TCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 79002 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| | |||||| || | ||| | | || || ||| ||| |||| | |||| ||| Sbjct 79001 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTATCC-TGAATTTTGGCCTTGA-CGT 78944 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| ||||| || | |||||||| || || || | || | Sbjct 78943 TGTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTT 78887 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| || ||||| Sbjct 78886 TGACAAATATCTGCAT 78871 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || ||||||||||||| ||| | ||| |||||| || || || |||||||| Sbjct 78870 ACCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGC 78811 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || || ||||| || || ||||| | ||||||||||| | || Sbjct 78810 AAGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAACCGCTGCTGGTCTGGGGG 78751 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||||||| | ||| |||| | || | | | | ||||| ||| | Sbjct 78750 AATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTC---T 78695 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||| ||||| || || | ||||| || ||||||||||| Sbjct 78694 CAACCTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 78643 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | ||||||||| | || ||||| |||||||||||||| || Sbjct 78641 CCTCCCCTCAGACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGCA 78582 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || || || || ||||| ||||| | | ||||||||| | || Sbjct 78581 AGGGTCCTTCCATCCTCGAGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGGA 78522 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | |||||||||| ||| ||| || | | | || || || |||| || Sbjct 78521 ATACCCTCCTTGTCCTGGATCTTTGCCTTTACATTGTCGACGGTATCTGAGCTC---TCA 78465 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| || |||||||||| || || ||||| || ||||| Sbjct 78464 ACTTCAAGGGTGATCGTCTTGCCCGTTAAAGTTTTAACAAAAATCTGCAT 78415 >seq8 Length=47755514 Score = 104 bits (114), Expect = 3e-17 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||| ||||||||||||||||| | ||||| | Sbjct 5427077 ACGGAGCACCAAATGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCTAAAGTCCTTCC 5427136 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | ||| |||||||| || || | | |||||| || | ||| | | |||||| Sbjct 5427137 ATCTTCCAACTGTTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTT 5427196 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170 |||| ||| | || | |||| ||| | | | |||||| ||| || || | ||| Sbjct 5427197 GTCC-TGAATCTTAGCCTTGA-CGTTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTG 5427254 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || || | |||||| ||||| || ||||| Sbjct 5427255 ATTGTTTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 5427292 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/221 (70%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| | ||||| || |||||| ||||| ||||||||||| ||||| || | Sbjct 5426849 ACGAAGCACAAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGACC 5426908 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||||||||| || || || | ||||| || | ||| | | |||||| Sbjct 5426909 ATCTTCCAACTGCTTACCAGCAAAGATCAGCCTTTGCTGATCTGGTGGGATACCCTCCTT 5426968 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTC---GCTCGATTCCACATCGACCG 42168 ||| ||| || || | ||| | | | || || ||| ||| || || | | Sbjct 5426969 ATCCTGGATCTTAGCCTTAA-CGTTGTCGATAGTATCTGAGCT---TTCAACCTCAAGAG 5427024 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||||||||| || || | ||||| ||||| || |||||| Sbjct 5427025 TGATGGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCATT 5427065 >seq1591 Length=249109 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | | || |||||| ||||| ||| |||||||||||| ||||| || || Sbjct 29262 CCTCCCCTCAGCCTCAGCACCAAGTGCAAGGTGGACTCCTTTTGAATGTTGTAGTCTGCA 29203 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || | |||||| || || || || || | ||||||||| | || Sbjct 29202 AGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 29143 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160 | | |||||||||| ||| || |||| ||| | | | ||||| ||| || Sbjct 29142 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCAGAACTTTCAAC 29084 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 29083 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 29036 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || |||||||| ||||||| |||| | || || |||||||| ||||| || Sbjct 29455 CTCTTTCTGGATATTGTAGTCAGCCAAGGTCCTTCCATCCTCGAGCTGCTTCCCAGCAAA 29396 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | ||||||||| | ||| | | |||||||||| ||| || ||| | | Sbjct 29395 GATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTAGCTTTTACATT 29336 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| ||||| || | ||||||||||| || || | ||||| Sbjct 29335 GTCGATGGTGTCAGAGCTC---TCCACCTCCAAGGTGATGGTTTTCCCAGTCAATGTCTT 29279 Query 42194 TACAAAGATTTGCATT 42209 || ||||| |||||| Sbjct 29278 CACGAAGATCTGCATT 29263 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| || || || | || || |||||||| |||||||| Sbjct 28998 TCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 28939 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | | ||||||||| | || | || |||||| ||| ||| |||| | |||| | Sbjct 28938 ATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCC-TGAATTTTGGCCTTGACATT 28880 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| ||| || || || | |||||||| ||||| || || || || Sbjct 28879 GTCGATGGTGTCAGAACTC---TCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTT 28823 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 28822 GACGAAGATCTGCAT 28808 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || ||||||||||| || || || || |||| || |||||||| || ||||| Sbjct 28543 CTCCTTCTGGATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAA 28484 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||| || | || | | || |||||| |||||| ||| | ||| Sbjct 28483 GATAAGCCTTTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGGATTTTGGCTTTTA-CGT 28425 Query 42137 CG-CCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| ||| || || || | |||||||| || || ||||| || | Sbjct 28424 TGTCGATTGTGTCGGAACTC---TCGACCTCAAGAGTGATGGTCTTTCCGGTTAGGGTTT 28368 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||| ||||| Sbjct 28367 TCACGAAGATCTGCAT 28352 >seq1629 Length=244661 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || |||||||| |||||||| | || |||||| || || || || || || Sbjct 134827 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGCA 134768 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| |||| || | ||| |||||||| || || | ||||||||||| | || Sbjct 134767 AGAGTCCTGCCGTCCTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 134708 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGA 42132 | | ||||||||| ||| ||| ||||| Sbjct 134707 ATACCCTCCTTGTCTTGGATCTTTGCTTTGA 134677 >seq6 Length=97571839 Score = 86.0 bits (94), Expect = 7e-12 Identities = 163/236 (69%), Gaps = 12/236 (5%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||||||||| | ||| | |||| ||||||||||||||||||||||| Sbjct 19666999 ACCTCCGCAAAGACGCAACACAAGATGGAGTGTGGATTCCTTTTGAATATTGTAATCAGC 19666940 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || || || || ||||| || || | | || ||||| | || Sbjct 19666939 AAGTGTTCGACCATCTTCCAGTTGTTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGG 19666880 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||||||| | ||| | ||||||| | | | | | | ||||| |||| | Sbjct 19666879 AATTCCTTCCTTGT-CTTGAATCTTTGTTTTAACATTGTCAATGGTGTCTGAGCTC---T 19666824 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC----TTTACAAAGATTTGCAT 42208 | || || | || ||||| || || || || ||| || || ||||||||||| Sbjct 19666823 CAACCTCCAGTGTTATGGTCTTTCCAGTAAGGGTCTTAATTAACGAAGATTTGCAT 19666768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542960246788960