Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 161 1e-34 seq1591 116 4e-21 seq1 116 4e-21 seq1898 100 3e-16 seq241 100 3e-16 seq8 96.9 3e-15 seq854 93.3 4e-14 seq12 91.5 1e-13 >seq2 Length=96359640 Score = 161 bits (178), Expect = 1e-34 Identities = 395/593 (67%), Gaps = 7/593 (1%) Strand=Plus/Plus Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950 ||| ||||| || || || ||||| ||||||||||| ||||| | ||||| |||||| Sbjct 42515840 CAAACAAGCGAAATCACAGTGCAAACCCTCGTCCCTTGAAATTAACTCGTTCGAGAAAGT 42515899 Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010 || || ||||| | || || ||||| | ||| ||||| || ||| || || || || Sbjct 42515900 TAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAGAAGCTTCCAGAGAA 42515959 Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCT 133070 || | || || || || || || |||| ||||| | || || ||| | Sbjct 42515960 AAAAATACCTTCCACACAAGCAAATGCAACCAAACGCTCCGCAAATGT---TTCGGAACC 42516016 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||||| || || ||||| | ||||| | | || || || || || || | || Sbjct 42516017 GTCGATCCAACGTAGTGCCCACTTCGCCTTCTTCTCAACACAGGGGATAGTCTCAACTGC 42516076 Query 133131 GTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATA 133190 | || || | | ||| || || ||| | ||| | || | || || Sbjct 42516077 GCGGAATAATCTGCTTTTTTCGTCAGAGTCCTTGATGTACGACTCTAGAAGCAGACTGTA 42516136 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCGCGCCTCGA 133249 ||| || ||||| | ||| || || |||||||| |||||||| ||||||| |||||||| Sbjct 42516137 CATCTCGGAGTGGATGTTTTCAATCGCGATTTGGAAGCCGTAGAAAGCAC-GCGCCTCGG 42516195 Query 133250 CCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGG 133309 | || || ||||||| ||| | || | || ||||| |||||||||||| || Sbjct 42516196 CAACTTGGACTTCTTTCATGAACCTTCCGGCTAGGTTTTCTAAAACGATGCCGTCGGAGG 42516255 Query 133310 CGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCC 133369 |||| |||||||| || ||||| |||||||||| | || | | | | | |||| Sbjct 42516256 CGGCAAAAAAGGCAAGGACGTGAGTGATGAAATGCCTTTCACCGGGGGTTAGGGTTTCCC 42516315 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||| || | || || | || || || || | ||||| || || ||| ||||| Sbjct 42516316 AGTGACGGTTATCGGAAGATAAATCGACTTCTTCAGCAGTCCAGAAAGAGGCCAAGGCTT 42516375 Query 133430 TTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACA-AACCG 133481 |||||||||| ||| || | | ||||| || || || || ||| ||||| Sbjct 42516376 TTTTGTACATTTCCCAAATTTGTGGGTATTGAATTGGGAACAT-ACAGAACCG 42516427 Score = 132 bits (146), Expect = 5e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| || ||||||||| | || ||||| || Sbjct 95422631 AAGATGCAGATCTTCGTGAAAACCCTGACGGGTAAGACCATCACCCTTGAGGTCGAATCC 95422690 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | |||| | || | ||| |||| ||||| || || || || | || Sbjct 95422691 TCCGACACAATCGACAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGCATCCCACCGGA 95422749 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||| ||||||||| ||| || |||||||| || || | || ||||| || || Sbjct 95422750 CCAGCAGAGGCTCATTTTCGCCGGAAAACAGCTTGAAGATGGCCGAACCCTAGCTGATTA 95422809 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| ||||| | || || ||||||||||| ||| Sbjct 95422810 CAACATCCAGAAGGAGTCCACTCTCCATTTGGTGCTCCGT 95422849 >seq1591 Length=249109 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| ||||||||| | || || || | Sbjct 29036 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAAAGTTCT 29095 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 29096 GACACTATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCA 29154 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || || || ||| |||| || | |||||||| |||||||| Sbjct 29155 GCAGAGGCTGATCTTTGCAGGAAAGCAGTTGGAAGATGGTCGCACCCTTGCAGACTACAA 29214 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| |||||||| | || |||| ||||||||| | |||| || || Sbjct 29215 CATTCAAAAGGAGTCCACCTTGCACTTGGTGCTGAGGCTGAGGGGAGG 29262 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| ||||||||| | || |||||| | Sbjct 28808 ATGCAGATCTTCGTCAAAACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGAGTTCT 28867 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||||| | || || ||||| |||||| | ||||| Sbjct 28868 GACACCATCGACAATGTCAAGGCCAAAATTCAGGATAAGGAGGGCATTCCCCCAGACCAG 28927 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| ||||| ||||| || || | || ||||| || |||||| Sbjct 28928 CAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTAGCTGATTACAAC 28987 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| |||| || ||| | || || ||| Sbjct 28988 ATCCAGAAGGAATCGACCCTTCATCTTGTCCTCCGT 29023 Score = 105 bits (116), Expect = 7e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| |||||||| |||||| | || ||||| | Sbjct 28580 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAAAGTTCT 28639 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||||| | || || ||||||||||| | ||||| Sbjct 28640 GACACCATCGATAATGTCAAGGCCAAAATTCAGGATAAGGAGGGAATTCCACCAGACCAG 28699 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| ||||| ||||| || || | || |||||| ||| |||||| Sbjct 28700 CAGAGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCGCCGATTACAAC 28759 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 28760 ATCCAGAAGGA 28770 >seq1 Length=110538649 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| ||||| |||||| | || || || | Sbjct 83615892 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTTGAGGTTGAATCT 83615833 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | |||| || |||| || || || || |||||| | || Sbjct 83615832 TCCGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAGGAAGGGATTCCCCCAGAT 83615773 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || |||| ||| || || ||||| || |||| || ||||| ||| ||| Sbjct 83615772 CAGCAGCGTCTGATTTTCGCCGGAAAGCAGCTTGAAGACGGCCGTACCCTAGCCGATTAC 83615713 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| |||| || ||| | ||||| ||| Sbjct 83615712 AACATCCAGAAGGAGTCGACTCTTCATCTCGTGCTCCGT 83615674 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || ||||| | ||||| ||||||||||| | || || ||| | | Sbjct 86550629 AATGCAAATCTTTGTTAAAACCTTAACGGGAAAAACCATCACATTAGAAGTTGAGAGCTC 86550570 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || || | | || | || || | || || || || ||||| |||||| Sbjct 86550569 AGACACGATTGACAATG-TGAAGGCGAAGATACGGGATAAGGAAGGTATTCCGCCCGACC 86550511 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||| | || || |||||| |||| || | | || || ||||||| Sbjct 86550510 AGCAGAGGCTCATCTTTGCTGGAAAACAGTTGGAGGATGGTAGGACACTGGCAGACTACA 86550451 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | ||||| ||||| | ||||| ||| | |||||| | ||||| || || Sbjct 86550450 ATATCCAGAAGGAGTCTACGCTCCATCTTGTGCTGAGGTTGAGGGGTGG 86550402 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| | || || ||||| || || | || || ||| | | Sbjct 14110192 ATGCAAATCTTTGTGAAAACCTTGACTGGGAAAACTATTACTCTTGAAGTTGAGAGCTCG 14110251 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | |||||| | || || || || ||||| | ||||| Sbjct 14110252 GACACCATCGACAATGTGAAGGCAAAAATTCAAGATAAGGAAGGGATTCCACCTGACCAG 14110311 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| |||| || || || ||||| || || | | || | || |||||| Sbjct 14110312 CAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACTTTAGCTGATTACAAC 14110371 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | || || |||||||||||||| |||| || || Sbjct 14110372 ATCCAGAAGGAATCAACCCTCCATTTGGTGCTGCGCCTGAGGGGTGG 14110418 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || ||||| |||||| | || || ||| | | Sbjct 14110420 ATGCAGATCTTTGTGAAGACATTGACAGGGAAAACTATCACCCTTGAAGTTGAGAGCTCG 14110479 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||||| | ||||| || ||||| || | ||||| Sbjct 14110480 GACACCATCGACAATGTGAAGGCTAAAATTCAAGACAAGGAAGGAATCCCACCTGACCAG 14110539 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | |||| || || || ||||| || |||| | | || || || || ||| Sbjct 14110540 CAGAGGTTGATTTTTGCAGGGAAGCAGCTTGAGGACGGGAGGACTCTTGCTGATTATAAC 14110599 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || || ||||||||||| || |||||||| || Sbjct 14110600 ATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGATTGAGAGGAGG 14110646 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || ||||| || ||||| |||||||||||||| |||| || ||| | Sbjct 14109508 ATGCAAATCTTTGTAAAGACCCTCACTGGCAAAACCATCACTCTCGAGGTTGAGAGTTCA 14109567 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||| | ||| |||| || || || |||||||| | || || Sbjct 14109568 GACACTATTGACAATGTTAAGGCAAAGATCCAAGATAAGGAAGGAATTCCTCCAGATCAG 14109627 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | || || || ||| | || || | ||| || || |||||||| Sbjct 14109628 CAAAGGTTGATCTTTGCTGGAAAGCAGTTAGAGGATGGGCGAACTCTTGCTGACTACAAT 14109687 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || || | || || ||| || | || || Sbjct 14109688 ATCCAAAAGGAGTCTACCCTCCACCTTGTCCTTCGTCTGCGTGGTGG 14109734 >seq1898 Length=217218 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| | |||||||| || |||||| | || || ||| | | Sbjct 78415 ATGCAGATTTTTGTTAAAACTTTAACGGGCAAGACGATCACCCTTGAAGTTGAGAGCTCA 78474 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | ||| | | | || | ||| |||| ||||| ||||| ||||| | ||||| Sbjct 78475 GATACCGTCGACAATGTAAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAG 78534 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || ||||| || || || | | ||||| || ||||| Sbjct 78535 CAGAGGTTGATATTTGCTGGGAAACAACTCGAGGATGGAAGGACCCTTGCAGATTACAAT 78594 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || || |||||| | || || ||||||||||| ||| |||| || ||| Sbjct 78595 ATTCAGAAGGAATCAACCCTTCATTTGGTGCTTCGTCTGAGGGGAGGC 78642 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || ||||| | || || || |||||||| | || || ||| | | Sbjct 78871 ATGCAGATATTTGTCAAAACTTTGACAGGAAAGACCATCACTTTGGAAGTGGAGAGCTCT 78930 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||||| | || ||||| || || || | || || Sbjct 78931 GACACTATTGACAACG-TCAAGGCCAAAATTCAGGATAAAGAAGGGATCCCACCAGATCA 78989 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | || || || |||||||| || | ||||||||| || ||||| Sbjct 78990 GCAGAGGCTCATATTTGCTGGTAAGCAGCTGGAGGATGGGCGCACCCTTGCAGATTACAA 79049 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||||| | || || || | ||||| || Sbjct 79050 TATCCAAAAGGAATCCACACTCCACCTTGTGCTTCG 79085 >seq241 Length=672200 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 38231 ACTCTTTaaaaaaaTGCAA-ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCG 38289 || ||| ||||||| | || | | || | || ||||| ||| ||||| |||||| | | Sbjct 541615 ACACTTAAAAAAAAGGTAACAGAATCTTCAATTTGCTCAAGGGTAAAACAATCACCCTTG 541674 Query 38290 ACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAA 38349 | || || | |||||| | | | | |||| || |||| || || || || | Sbjct 541675 AGGTTGAATCTTCCGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAGGAAGGGA 541734 Query 38350 TTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||| | || |||||||| || |||| ||| || || ||||| || |||| | |||| Sbjct 541735 TTCCCCCAGATCAACAGCGTCTGATTTTCGCCGGAAAGCAGCTTGAAGACGGCTGTACCC 541794 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | ||| ||||||||||| ||||| |||| || ||| | ||||| ||| Sbjct 541795 TAGCCGATTACAACATCCAGAAGGAGTCGACTCTTCATCTCGTGCTCCGT 541844 >seq8 Length=47755514 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || || ||| | || || || | || Sbjct 5427748 ATGCAGATCTTCGTCAAAACCCTAACTGGAAAGACGATAACCCTTGAGGTTGAAAGCTCC 5427689 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || || | || || || ||||| ||||||| ||| Sbjct 5427688 GACACAATTGACAACG-TCAAGGCTAAGATTCAGGATAAGGAAGGAAT-CCCGCCGGACC 5427631 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| || | || | ||| || || ||||| || |||| | ||||| |||||||| Sbjct 5427630 AGCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCAGAACCCTAGCCGACTACA 5427571 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||| || || |||||||| ||| | | ||||| Sbjct 5427570 ACATCCAGAAGGAGTCGACCCTTCACTTGGTGCTCCGTCTTCGTGGCGG 5427522 >seq854 Length=364260 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || ||||| || ||||| || |||||||| || |||| || ||| || Sbjct 69041 ATGCAAATCTTTGTAAAGACACTCACCGGAAAAACCATTACTCTCGAGGTTGAGAGTTCC 69100 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| || |||||||| |||| || Sbjct 69101 GACACTATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGAATTCCTCCCGATCAG 69160 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||||| || || | ||||| || ||||||||| Sbjct 69161 CAGAGGTTGATCTTTGCTGGAAAGCAGCTAGAGGATGGCCGCACTCTTGCAGACTACAAC 69220 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || || || | || || ||| Sbjct 69221 ATCCAAAAGGAATCCACCCTTCACCTTGTCCTCCGT 69256 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| | || || || ||||||||| | || || ||| | || Sbjct 69497 ATGCAGATTTTTGTGAAAACTTTGACTGGGAAGACCATCACCCTTGAGGTTGAGAGCTCC 69556 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | || |||| |||||||| || || || | || || Sbjct 69557 GACACCATTGACAATGTTAAGGCGAAGATCCAGGACAAAGAAGGCATCCCTCCAGATCAG 69616 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||||| || || | |||||| || |||||||||| Sbjct 69617 CAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAGGATGGGCGCACTCTTGCCGACTACAAC 69676 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || | || || ||| || | || || Sbjct 69677 ATCCAGAAGGAGTCCACCCTTCACCTTGTCCTCCGTCTGCGTGGTGG 69723 >seq12 Length=53491057 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| |||||||| || || || ||||| || || || ||| | || || ||| | Sbjct 49993899 AAAGATGCAGATATTCGTGAAGACCCTGACGGGGAAGACTATTACCTTAGAGGTAGAGTC 49993840 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | |||| | || || | || || || || ||||| | || Sbjct 49993839 ATCGGACACCATTGACAATGTTAAGGCTAAGATTCAGGATAAGGAAGGCATTCCACCGGA 49993780 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||||||| | |||| ||| || || ||||| || || | || || || ||||| Sbjct 49993779 CCAACAGCGGTTGATTTTCGCAGGAAAGCAGCTTGAGGATGGCCGAACACTAGCTGACTA 49993720 Query 38420 CAACATCCAAAAGGA 38434 ||||||||| ||||| Sbjct 49993719 CAACATCCAGAAGGA 49993705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499940257160960