Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1 140 5e-28 seq854 116 5e-21 seq1898 109 8e-19 seq1629 95.1 2e-14 seq8 93.3 6e-14 >seq1 Length=110538649 Score = 140 bits (154), Expect = 5e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| |||| ||||||||||||||||| || ||||| ||||| || || Sbjct 86551311 AATGCAAATATTTGTTAAGACATTGACTGGAAAAACAATCACATTGGAAGTTGAGAGCTC 86551252 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | |||| ||||| || ||||| |||||||| ||||| || || || || || Sbjct 86551251 GGACACTATTGATAACGTTAAGGCGAAAATTCAAGATAAGGAAGGTATTCCACCGGACCA 86551192 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||| |||||| ||| || ||||| | |||||| | ||| | |||||||||| Sbjct 86551191 ACAAAGGCTGATTTTTGCTGGGAAGCAATTGGAAGATGGGCGCACTCTGGCAGATTATAA 86551132 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGT 156031 ||| || ||| ||| | ||||| || |||| Sbjct 86551131 TAT-TCAAAAGGAGTCAACGCTCCACCTAGT 86551102 Score = 120 bits (132), Expect = 4e-22 Identities = 142/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||| | ||| ||||||| |||||||||||||| || ||||| ||||||||| || Sbjct 85489415 AATGCAAGTTTTTGTTAAAACCTTGACTGGAAAAACAATCACATTGGAAGTCGAAAGCTC 85489474 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || || || ||||| |||||||| ||||| || || ||||| || Sbjct 85489475 GGACACGATTGATAATGTTAAGGCCAAAATCCAAGATAAGGAAGGTATTCCACCAGATCA 85489534 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| | ||||| | ||| || || |||||||| ||| | ||| | | ||||| || Sbjct 85489535 ACAACGTTTGATCTTTGCAGGAAAACAGCTCGAGGATGGGCGTACTCTCGCGGATTACAA 85489594 Query 156002 TATATCCAAAG 156012 ||| || |||| Sbjct 85489595 TAT-TCAAAAG 85489604 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||||||||||| || || || ||||| |||||||||||||| || || Sbjct 85489643 AATGCAAATCTTTATTAAAACCTTAACCGGGAAAACCATTACATTAGAAGTTGAGAGCTC 85489702 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || || || ||||| |||||||| ||||| || || |||| || Sbjct 85489703 GGACACAATTGATAATGTTAAGGCGAAAATCCAAGATAAGGAAGGTATCCCGTCAGACCA 85489762 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || |||||| ||| || ||||| | |||||| ||||| | | |||||||| Sbjct 85489763 GCAGAGGCTGATTTTTGCTGGGAAGCAATTAGAAGATGGACGAACTCTGGCTGATTATAA 85489822 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || || | || ||||| | || | ||||| || ||||| Sbjct 85489823 CATCCAGAAGGAATCCACCCTTCACCTTGTTCTCAGATTGAGGGGCGG 85489870 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| ||||| ||||| |||||||| | || || || ||| Sbjct 14109964 ATGCAGATCTTTGTAAAAACTTTGACAGGAAAGACTATTACCCTTGAGGTTGAGAGTTCC 14110023 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| |||||| || |||||||||||||| |||||||| || Sbjct 14110024 GATACAATTGACAATGTCAAAGCTAAAATCCAGGATAAAGAAGGCATTCCTCCAGATCAG 14110083 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||| | || || ||||| || || ||| Sbjct 14110084 CAGAGGTTGATCTTCGCTGGAAAGCAACTTGAGGAT 14110119 Score = 100 bits (110), Expect = 4e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| |||||||| ||||||||||| | ||||| || || Sbjct 14110192 ATGCAAATCTTTGTGAAAACCTTGACTGGGAAAACTATTACTCTTGAAGTTGAGAGCTCG 14110251 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || || ||||| ||||| |||||||| ||||| || || || || || Sbjct 14110252 GACACCATCGACAATGTGAAGGCAAAAATTCAAGATAAGGAAGGGATTCCACCTGACCAG 14110311 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | |||| ||| || |||||||| || ||| || |||||| | ||||| || Sbjct 14110312 CAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACTTTAGCTGATTACAAC 14110371 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || || | || || ||||| ||| Sbjct 14110372 ATCCAGAAGGAATCAACCCTCCATTTGGTG 14110401 Score = 91.5 bits (100), Expect = 2e-13 Identities = 135/190 (71%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||| || || || || || || || || || |||| Sbjct 85489872 ATGCAGATCTTTGTGAAGACGTTGACGGGGAAGACGATCACGTTGGAGGTGGAGAGTTCT 85489931 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| || ||||| ||||| || || || || ||||| || Sbjct 85489932 GATACCATTGACAATGTGAAGGCCAAGATACAGGATAAGGAGGGTATCCCACCAGACCAG 85489991 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||||| ||| || || || | |||||| || ||| | ||||||||||| Sbjct 85489992 CAGAGACTGATTTTTGCAGGGAAACAATTGGAAGATGGAAGGACTCTTGCAGATTATAAT 85490051 Query 156003 ATATCCAAAG 156012 || || |||| Sbjct 85490052 AT-TCAAAAG 85490060 Score = 89.7 bits (98), Expect = 8e-13 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||| || || || || || || || || || ||| Sbjct 86550854 ATGCAGATCTTTGTGAAGAC--TGACGGGGAAGACGATCACGTTGGAGGTGGAGAGTTCC 86550797 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| || ||||| |||| || || || || ||||| || Sbjct 86550796 GATACCATTGATAATGTGAAGGCCAAGATACAGTATAAGGAGGGTATCCCACCAGACCAG 86550737 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||| || || || | |||||| |||||| || | |||||||| Sbjct 86550736 CAAAGATTGATTTTTGCAGGGAAACAATTAGAAGATGGAAGAACTCTAGCTGATTATAAC 86550677 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGT 156031 || || ||| ||| |||| || || |||| Sbjct 86550676 AT-TCAAAAGGAGTCGACACTCCACCTAGT 86550648 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| ||||||| || || |||||||| || ||||||||||| || || Sbjct 86550629 AATGCAAATCTTTGTTAAAACCTTAACGGGAAAAACCATCACATTAGAAGTTGAGAGCTC 86550570 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || ||||| || |||| ||||| ||||| || || || || || Sbjct 86550569 AGACACGATTGACAATGTGAAGGCGAAGATACGGGATAAGGAAGGTATTCCGCCCGACCA 86550510 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || | || | ||| || || ||| | || ||| || || | |||| || || Sbjct 86550509 GCAGAGGCTCATCTTTGCTGGAAAACAGTTGGAGGATGGTAGGACACTGGCAGACTACAA 86550450 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||| || ||| | ||||| ||| | ||| | || || || || || Sbjct 86550449 TATCCAGAAGGAGTCTACGCTCCATCTTGTGCTGAGGTTGAGGGGTGG 86550402 Score = 86.0 bits (94), Expect = 9e-12 Identities = 163/236 (69%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 155816 TAATAAA-ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCG 155874 ||||| | ||||| || ||| ||||||| || ||||||||||| || ||| | ||||| | Sbjct 85489180 TAATACAGATGCAGATCTTTGTTAAAACCTTAACTGGAAAAACCATCACACTGGAAGTTG 85489239 Query 155875 AAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTC 155934 || | || || | || || || || ||||| ||||| || || || || || | Sbjct 85489240 AAAACTCAGACACGATAGATAATGTTAAGGCGAAAATTCAAGACAAGGAGGGTATTCCAC 85489299 Query 155935 CAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAG 155994 | || || || || |||| | ||| || ||||| | |||||| | || | ||| Sbjct 85489300 CGGATCAGCAGAGGCTGATATTTGCAGGGAAGCAATTGGAAGATGGGCGTACACTCGCAG 85489359 Query 155995 ATTATAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 |||||||||| || ||| ||| | || || || | || | || ||||| || || Sbjct 85489360 ATTATAATAT-TCAAAAGGAGTCAACTCTCCACCTTGTTCTCAGGTTAAGGGGTGG 85489414 >seq854 Length=364260 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || ||| |||| || || || || || || || || ||| |||| Sbjct 69953 ATGCAGATCTTTGTGAAGACACTGACAGGGAAGACAATCACCTTGGAGGTTGAAAGTTCT 70012 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || |||||||||||||| || || ||||| || Sbjct 70013 GATACAATTGATAATGTAAAGGCGAAGATCCAAGATAAAGAAGGGATTCCGCCAGATCAG 70072 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||||| | ||| ||||||||||| || ||| || ||| | | ||||||||| Sbjct 70073 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTATAAT 70132 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || |||||| | || || ||||| ||| || | || || || || Sbjct 70133 ATCCAGAAAGAGTCCACACTGCATTTGGTGCTACGTTTGAGGGGAGG 70179 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | ||||| || || || || || || || || ||| Sbjct 70181 ATGCAAATATTTGTCAAGACTCTAACTGGGAAGACCATCACTTTGGAGGTGGAGAGCTCT 70240 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||||||| || || || || || || || || || ||||| || Sbjct 70241 GATACTATTGATAACGTGAAAGCGAAGATTCAGGACAAGGAGGGTATTCCACCAGATCAG 70300 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| |||||| ||| ||||||||||| || ||| | || | |||||||||| Sbjct 70301 CAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACCCTTGCAGATTATAAC 70360 Query 156003 ATATCCAAAGAGGCGACGCTTCA 156025 || ||||| | || ||||| Sbjct 70361 ATCCAGAAAGAATCCACCCTTCA 70383 >seq1898 Length=217218 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || ||||| ||||||||||| || || || || || ||| Sbjct 78643 ATGCAAATCTTCGTCAAGACTTTGACAGGAAAAACTATCACCTTGGAGGTTGAGAGTTCA 78702 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||||| ||||| ||||| || ||||| || || ||||| || Sbjct 78703 GACACAATTGATAACGTGAAGGCCAAAATTCAAGACAAGGAAGGGATTCCCCCAGACCAG 78762 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | ||| || ||||| || |||||| || || | | |||||||| Sbjct 78763 CAGCGGTTGATATTTGCAGGGAAGCAACTTGAAGATGGAAGGACACTTGCTGATTATAAC 78822 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| || ||| |||| |||||| | ||||| | || || || ||| Sbjct 78823 ATACAGAAGGAGTCGACACTTCATCTGGTGTTGCGTTTGAGGGGAGGT 78870 Score = 100 bits (110), Expect = 4e-16 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | ||||| ||||| ||||| || || || || ||||| || ||| Sbjct 78871 ATGCAGATATTTGTCAAAACTTTGACAGGAAAGACCATCACTTTGGAAGTGGAGAGCTCT 78930 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| || ||||| || ||||||||||| || || ||||| || Sbjct 78931 GACACTATTGACAACGTCAAGGCCAAAATTCAGGATAAAGAAGGGATCCCACCAGATCAG 78990 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| ||||||||||| || ||| | || | ||||||| | Sbjct 78991 CAGAGGCTCATATTTGCTGGTAAGCAGCTGGAGGATGGGCGCACCCTTGCAGATTACA-- 79048 Query 156003 ATATCCAAA 156011 ||||||||| Sbjct 79049 ATATCCAAA 79057 >seq1629 Length=244661 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || ||||||||||| || || || || || || || || || Sbjct 134829 ATGCAGATCTTTGTGAAGACATTGACTGGGAAGACAATCACCTTGGAGGTGGAGAGCTCA 134888 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| || ||||| ||||| |||||||| || ||||| || Sbjct 134889 GATACCATTGACAATGTGAAGGCAAAGATACAGGATAAGGAAGGCATTCCACCAGATCAG 134948 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| ||||||||||| || ||| | | || | |||| || ||| Sbjct 134949 CAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACGCTTGCAGACTACAAT 135008 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || |||||| | || |||||| | ||| Sbjct 135009 ATCCAGAAAGAGTCTACTCTTCATCTCGTG 135038 >seq8 Length=47755514 Score = 93.3 bits (102), Expect = 6e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | ||||| | ||||| ||||| || || | || || ||| || Sbjct 5427520 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAAACAATCACCCTTGAGGTTGAAAGCTCC 5427461 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| || ||| || || ||||| ||||| || || || || || Sbjct 5427460 GACACTATTGACAACGTTAAGGCTAAGATTCAGGATAAGGAAGGAATCCCACCGGACCAG 5427401 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | |||||| |||||||||||||| |||||| || | ||||| || Sbjct 5427400 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAAGACGGCAGAACCCTAGCTGATTACAAC 5427341 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || ||| | || ||||| || || Sbjct 5427340 ATCCAGAAGGAGTCTACCCTTCACTTGGT 5427312 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 155810 TTTATGTA-ATAAA-ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867 ||| |||| ||| | ||||| || || | ||||| | |||||||| || || || | Sbjct 5427763 TTTCTGTATATACAGATGCAGATCTTCGTCAAAACCCTAACTGGAAAGACGATAACCCTT 5427704 Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927 || || ||| || || | ||| ||||| || ||| || || ||||| ||||| Sbjct 5427703 GAGGTTGAAAGCTCCGACACAATTGACAACGTCAAGGCTAAGATTCAGGATAAGGAAGGA 5427644 Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987 || || || || || || || ||||| | ||||| |||||||||||||| |||||| Sbjct 5427643 ATCCCGCCGGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCAGAACC 5427584 Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || | || || || || || ||| |||| ||||| || ||| Sbjct 5427583 CTAGCCGACTACAACATCCAGAAGGAGTCGACCCTTCACTTGGTG 5427539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731531734410400