Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 134 3e-26 seq6 123 5e-23 seq8 122 2e-22 seq854 113 9e-20 seq1898 104 5e-17 seq1629 98.7 2e-15 seq2 96.9 7e-15 seq1591 93.3 8e-14 seq12 84.2 4e-11 >seq1 Length=110538649 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || ||||||||||| | | ||| || |||| |||||||| || || ||||| | Sbjct 85489376 CTTTTGA-ATATTATAATCTGCGAGTGTACGCCCATCTTCCAATTGCTTCCCTGCAAATA 85489318 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | ||||| ||||| ||||| || || || || ||||| ||||| || |||||| Sbjct 85489317 TCAGCCTCTGCTGATCCGGTGGAATACCCTCCTTGTCTTGAATTTTCGCCTTAACATTAT 85489258 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 ||| | ||||| ||| ||||| || || |||||||| |||||||| ||||||| || Sbjct 85489257 CTATCGTGTCTGAGTTTTCAACTTCCAGTGTGATGGTTTTTCCAGTTAAGGTTTTAACAA 85489198 Query 192527 ATATCTGCAT-TTTATTA 192543 | |||||||| | ||||| Sbjct 85489197 AGATCTGCATCTGTATTA 85489180 Score = 120 bits (132), Expect = 6e-22 Identities = 137/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| |||||||||| | |||||| |||| || ||||| || |||||||| || | || Sbjct 85489826 GATGTTATAATCAGCCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAAATCAGCCT 85489767 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| || || | || || ||||| |||||||| ||||| || |||||| || | Sbjct 85489766 CTGCTGGTCTGACGGGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGT 85489707 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||||| ||||||||||| || ||||| ||||||||||| || || Sbjct 85489706 GTCCGAGCTCTCAACTTCTAATGTAATGGTTTTCCCGGTTAAGGTTTTAATAAAGATTTG 85489647 Query 192534 CATT 192537 |||| Sbjct 85489646 CATT 85489643 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| || || | | || | ||| | ||||| ||| || |||||| ||||||| Sbjct 85490554 CCACCCCTCAGCCTCAGCACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCC 85490495 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 ||||| | |||| ||||| || || ||||||||||| | |||||||| || ||||| Sbjct 85490494 AATGTCCTACCATCCTCCAACTGCTTCCCAGCAAAGATAAGCCTCTGTTGGTCCGGTGGA 85490435 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || || || ||||| ||||| || || ||||| || | ||||| || ||| Sbjct 85490434 ATACCCTCCTTATCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACT 85490375 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || ||||| || || ||||| ||||||| || || |||||| Sbjct 85490374 TCCAGTGTGATGGTCTTTCCTGTTAAAGTTTTAACGAAGATTTGCATT 85490327 Score = 114 bits (126), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||| || | |||| || | || | ||| ||| || ||||||||||| Sbjct 86551081 ATTCCACCACGAAGGCGAAGGACTAGGTGGAGCGTTGACTCCTTTTGA-ATATTATAATC 86551139 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | | || || |||| |||||||| || |||||||| || | || ||||| || || Sbjct 86551140 TGCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAAAATCAGCCTTTGTTGGTCCGG 86551199 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || ||||| |||||||| ||||| || || ||| |||| || || || Sbjct 86551200 TGGAATACCTTCCTTATCTTGAATTTTCGCCTTAACGTTATCAATAGTGTCCGAGCTCTC 86551259 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | || || ||||| ||||| ||||| |||| |||||| |||||| Sbjct 86551260 AACTTCCAATGTGATTGTTTTTCCAGTCAATGTCTTAACAAATATTTGCATT 86551311 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || | || | |||| ||| || |||||| || ||| Sbjct 14109737 ATACCACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTGTAGTCA 14109678 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||||| |||| || || || || ||||||||||| || || || ||||| || Sbjct 14109677 GCAAGAGTTCGCCCATCCTCTAACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGA 14109618 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| |||||||| || || || ||||| |||| ||||| || Sbjct 14109617 GGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCAATAGTGTCTGAACTCTCA 14109558 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| |||||||| ||||| | || || | ||| || ||||| Sbjct 14109557 ACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 14109508 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| || || | | || | ||| | ||| | || || ||||| || ||| Sbjct 14110193 ATACCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCA 14110134 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | ||| || ||||| ||||| || ||||| ||||| || Sbjct 14110133 GCAAGGGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGATCTGGA 14110074 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || |||||| ||| ||||| || | ||| || || Sbjct 14110073 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTCTCA 14110014 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 14110013 ACCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 14109964 Score = 100 bits (110), Expect = 6e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||| || | |||| || | || | ||| ||| || || ||||| || Sbjct 85490329 ATTCCACCACGAAGGCGAAGGACTAGGTGGAGTGTTGACTCCTTTTGA-ATGTTATAGTC 85490271 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || | | || ||||||||||| |||||||| || | ||||| ||||| || Sbjct 85490270 AGCAAGAGTCCTCCCGTCTTCCAATTGTTTCCCAGCAAAAATCAGCCTCTGCTGATCCGG 85490211 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || ||||| || ||||| ||||| || ||||| ||| | || || || Sbjct 85490210 TGGAATGCCTTCCTTGTCTTGAATTTTGGCCTTAACATTGTCTATCGTGTCCGAGCTCTC 85490151 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | || || ||||| |||||||| || |||| ||| || |||||| Sbjct 85490150 AACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAGATTTGCATT 85490099 Score = 100 bits (110), Expect = 6e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 192340 GTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCA 192399 |||| ||| || |||||| || || | | ||| | |||| ||||| ||||| ||| Sbjct 86550432 GTAGACTCCTTCTGGATATTGTAGTCTGCCAGTGTCCTACCATCCTCCAACTGTTTTCCA 86550491 Query 192400 GCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 192459 |||||||| | ||||| || || || || || ||||| ||||| |||| || || Sbjct 86550492 GCAAAGATGAGCCTCTGCTGGTCGGGCGGAATACCTTCCTTATCCCGTATCTTCGCCTTC 86550551 Query 192460 ACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 192519 ||||| || | ||||| || ||||||| || |||||||| || ||||| ||| Sbjct 86550552 ACATTGTCAATCGTGTCTGAGCTCTCAACTTCTAATGTGATGGTTTTTCCCGTTAAGGTT 86550611 Query 192520 TTAATAAATATCTGCATT 192537 |||| ||| || |||||| Sbjct 86550612 TTAACAAAGATTTGCATT 86550629 >seq6 Length=97571839 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| || | |||||| || || | ||| | ||| | || || || |||||||||| Sbjct 19649560 ACCTCCACGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATGTTATAATCAGT 19649501 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||||| |||| || | |||||| |||||||| ||||| || |||||||| || || Sbjct 19649500 CAGTGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 19649441 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 ||||||||||| ||||| ||||| |||| ||||| || | || | || || Sbjct 19649440 AATTCCTTCTTTGTCTTGAATTTTTGTTTTAACATTGTCAATGGTGTCACAGCTCTCAAC 19649381 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || |||||||| || || || | ||| |||| ||| || ||||| Sbjct 19649380 CTCAAGTGTAATGGTCTTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 19649333 >seq8 Length=47755514 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || ||||| | || | ||| || ||||| |||||| Sbjct 5427063 ATTCCACCACGAAGACGGAGCACCAAATGAAGGGTGGACTCCTTCTGAATATTGTAATCA 5427122 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | ||| || | | |||| ||||| ||||||||||||||||| || ||||| ||||| ||| Sbjct 5427123 GCTAAAGTCCTTCCATCTTCCAACTGTTTACCAGCAAAGATCAACCTCTGCTGATCTGGT 5427182 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || || || || ||| || || || || | || || ||| Sbjct 5427183 GGGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATTGTGTCGGAGCTTTCG 5427242 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || ||||| || || || || || | ||| |||||||| Sbjct 5427243 ACTTCAAGGGTGATTGTTTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 5427292 Score = 120 bits (132), Expect = 6e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || | || ||||| | ||| || || || |||||| Sbjct 5426835 ATCCCACCACGAAGACGAAGCACAAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCA 5426894 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| ||||| || |||||||||||||| | || || ||||| ||| Sbjct 5426895 GCAAGAGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAGCCTTTGCTGATCTGGT 5426954 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||| || || ||| || || || |||| |||||| ||| Sbjct 5426955 GGGATACCCTCCTTATCCTGGATCTTAGCCTTAACGTTGTCGATAGTATCTGAGCTTTCA 5427014 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||| |||||||| ||||| || || || | ||| ||||||||| Sbjct 5427015 ACCTCAAGAGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCATT 5427065 >seq854 Length=364260 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || || | ||||| || ||||| | || | |||||| ||||||||||||| Sbjct 70182 ATCCCTCCCCTCAAACGTAGCACCAAATGCAGTGTGGACTCTTTCTGGATATTATAATCA 70123 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | |||| || | || |||||||||||||| |||| ||| ||||| || Sbjct 70122 GCAAGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGC 70063 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || ||||||||| || | ||| || ||| Sbjct 70062 GGAATCCCTTCTTTATCTTGGATCTTCGCCTTTACATTATCAATTGTATCAGAACTTTCA 70003 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || || || || || || | ||| || | ||| |||||||| Sbjct 70002 ACCTCCAAGGTGATTGTCTTCCCTGTCAGTGTCTTCACAAAGATCTGCAT 69953 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| || | || || ||||||||||| || ||||| ||||| || || |||||||| | Sbjct 69197 CATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGAATTCCTTCCT 69138 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || ||| || |||||| |||| || || || || || ||||||| Sbjct 69137 TGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCGGAACTCTCAACCTCGAGAGTAA 69078 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || | ||| || | ||| || ||||| Sbjct 69077 TGGTTTTTCCGGTGAGTGTCTTTACAAAGATTTGCAT 69041 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| ||| |||||||| | | || || |||| |||| || ||||||||||| Sbjct 70371 TCTTTCTGGATGTTATAATCTGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAA 70312 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 || | || || ||||| ||||| || || || || || || || || ||| || ||| Sbjct 70311 ATCAGCCTTTGCTGATCTGGTGGAATACCCTCCTTGTCCTGAATCTTCGCTTTCACGTTA 70252 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 |||| ||| || || || || | ||| ||||| || ||||||| || || | | Sbjct 70251 TCAATAGTATCAGAGCTCTCCACCTCCAAAGTGATGGTCTTCCCAGTTAGAGTCTTGACA 70192 Query 192526 AATATCTGCAT 192536 ||||| ||||| Sbjct 70191 AATATTTGCAT 70181 >seq1898 Length=217218 Score = 104 bits (114), Expect = 5e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||||| | || | || | |||| ||| ||| || ||||| ||||| Sbjct 78416 ATGCCACCACGTAGACGGAGGACAAGGTGGAGGGTAGACTCCTTTTGA-ATATTGTAATC 78358 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | ||||| |||| || | || || ||||||||||| | ||||| || || || Sbjct 78357 AGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGG 78298 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||| || ||||| ||||| || || ||| || | ||||| || Sbjct 78297 GGGAATCCCTTCCTTGTCTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTC 78238 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || |||||||||||||| ||||| | ||| || | ||| |||||||| Sbjct 78237 AACCTCGAGAGTAATGGTTTTCCCAGTGAGTGTCTTTACAAAGATCTGCAT 78187 Score = 100 bits (110), Expect = 6e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||| | | || || |||| |||| || ||||||||||| || | || Sbjct 79053 GATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCT 78994 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| ||||| || ||||||||||| || ||||| || || || |||| Sbjct 78993 CTGCTGATCTGGTGGGATCCCTTCTTTATCCTGAATTTTGGCCTTGACGTTGTCAATAGT 78934 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||| | ||| ||||| || || || || ||||| | ||||||||| Sbjct 78933 GTCAGAGCTCTCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAATATCTG 78874 Query 192534 CAT 192536 ||| Sbjct 78873 CAT 78871 >seq1629 Length=244661 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392 ||| | ||||| |||||| |||||| || || | | || || |||| || | || Sbjct 135032 ATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGCGTGCGGCCATCCTCAAGCTG 134973 Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 |||||||||||||| | ||||| ||||| ||||| || ||||| ||||| ||||| || Sbjct 134972 CTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCTTCCTTATCCTGTATCTT 134913 Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 || ||||| || | |||||| || || || | || || || || ||||| Sbjct 134912 TGCCTTCACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAGGTGATTGTCTTCCCAGT 134853 Query 192513 TAATGTTTTAATAAATATCTGCAT 192536 ||||| || | ||| |||||||| Sbjct 134852 CAATGTCTTCACAAAGATCTGCAT 134829 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||||||||| | || | || | || | |||||| || || ||||| Sbjct 134602 ATGCCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGACTCTTTCTGAATGTTGTAATCT 134543 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | ||||| | | || || | ||| || || |||||||| | |||||| || || || Sbjct 134542 GCCAATGTCCTCCCGTCCTCAAGTTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGA 134483 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || ||| ||||| || | |||||| ||| Sbjct 134482 GGAATACCTTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATGGTATCTGAACTTTCA 134423 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || || || | || || | ||| |||||||| Sbjct 134422 ACTTCAAGGGTGATTGTCTTGCCGGTAAGCGTCTTGACAAAGATCTGCAT 134373 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || || | ||| || || ||||| | ||| | ||| || ||| ||||| || Sbjct 134830 ATCCCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTCTGGATGTTATAGTCC 134771 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | || ||||| ||||||||||||||||| || | ||| || || || Sbjct 134770 GCAAGAGTCCTGCCGTCCTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGC 134711 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || ||| ||||| || | ||| || || Sbjct 134710 GGGATACCCTCCTTGTCTTGGATCTTTGCTTTGACATTGTCAATGGTATCAGAACTCTCA 134651 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| || || || ||||| || || || | ||| |||||||| Sbjct 134650 ACCTCCAAAGTTATTGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 134601 >seq2 Length=96359640 Score = 96.9 bits (106), Expect = 7e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 ||||| || |||||| || |||||||||||||| || || || || || |||||| Sbjct 42515841 AAACAAGCGAAATCACAGTGCAAACCCTCGTCCCTTGAAATTAACTCGTTCGAGAAAGTT 42515900 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 ||||| |||||||| || | |||||| | ||| ||||| | || || | ||| || Sbjct 42515901 AATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAGAAGCTTCCAGAGAAA 42515960 Query 49941 AATATACCCTCGACACACGCAAATGC 49966 || ||||| || ||||| |||||||| Sbjct 42515961 AAAATACCTTCCACACAAGCAAATGC 42515986 >seq1591 Length=249109 Score = 93.3 bits (102), Expect = 8e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||||| | || | || | || | |||||| |||||| || |||| Sbjct 29491 ACCACCACGGAGACGGAGGACAAGGTGAAGGGTTGACTCTTTCTGGATATTGTAGTCAGC 29432 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || | | |||| || | || || ||||||||||| || ||||| || || ||||| Sbjct 29431 CAAGGTCCTTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGG 29372 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || || || || ||| ||||||||| || | || || || || Sbjct 29371 GATACCCTCCTTGTCCTGGATCTTAGCTTTTACATTGTCGATGGTGTCAGAGCTCTCCAC 29312 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || | || |||||||| ||||| ||||| || | || ||||||||| Sbjct 29311 CTCCAAGGTGATGGTTTTCCCAGTCAATGTCTTCACGAAGATCTGCATT 29263 >seq12 Length=53491057 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || |||| || |||||| |||| || | || || || || || || || | Sbjct 49993713 GATGTTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTGCTTTCCTGCGAAAATCAACCG 49993772 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||| || ||||| || ||||| ||||| || || ||| || ||||| || | Sbjct 49993773 CTGTTGGTCCGGTGGAATGCCTTCCTTATCCTGAATCTTAGCCTTAACATTGTCAATGGT 49993832 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||| |||| ||||| || || || || | || || | |||||||| Sbjct 49993833 GTCCGATGACTCTACCTCTAAGGTAATAGTCTTCCCCGTCAGGGTCTTCACGAATATCTG 49993892 Query 192534 CATTTT 192539 ||| || Sbjct 49993893 CATCTT 49993898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984010847901900