Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1389 84.2 5e-11 >seq1389 Length=271855 Score = 84.2 bits (92), Expect = 5e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||||| |||||| ||||||| || || ||||||||||| |||| |||| |||| Sbjct 69170 GTTCTCTTCAATCGGCAACCCAGCCTACACAAAATGTCTATTATGGGGCATAGGATCAAG 69229 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449 | | | | || || || || ||| || || | | | ||||| ||||| ||| Sbjct 69230 ATCATGCCATACTCAACCTTCCGGTTGAATTTATCTGTTACTTCTCCTTACAATGCTGAT 69289 Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 |||||||| || |||||||| |||||||| || |||||| Sbjct 69290 TTTGATGGTGACGAAATGAACATGCATGTTCCCCAATCA 69328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186247226585434