Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 132 3e-26 seq6 114 8e-21 seq2 105 4e-18 seq854 104 2e-17 seq1629 102 5e-17 seq241 98.7 7e-16 seq3 87.8 1e-12 seq8 86.0 4e-12 seq1591 84.2 1e-11 >seq1 Length=110538649 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||| | ||| ||||| ||| || || ||||||||||||| Sbjct 83615661 CACCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGG 83615720 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || |||| || | || |||||||| ||||||| ||||||||||||| | | Sbjct 83615721 CTAGGGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGG 83615780 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| || || || || |||| |||| ||| | |||||| ||||| Sbjct 83615781 GAATCCCTTCCTTATCTTGGATCTTGGCTTTC-ACATTGTCGATTGTGTCGGAAGATTCA 83615839 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| |||||||| |||| ||||| || ||||||||||| Sbjct 83615840 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 83615889 Score = 122 bits (134), Expect = 6e-23 Identities = 176/242 (73%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || |||||||| || | ||||||||| || ||| |||||| || ||| Sbjct 14110658 AAAATCTGCATCCCTCCTCTCAATCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATG 14110599 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| | || || | |||| || | || || || ||||||||||| | |||| Sbjct 14110598 TTATAATCAGCAAGAGTCCTCCCGTCCTCAAGCTGCTTCCCTGCAAAAATCAACCTCTGC 14110539 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||||| ||||| |||||| ||| |||| ||| | |||||| Sbjct 14110538 TGGTCAGGTGGGATTCCTTCCTTGTCTTGAATTTTAGCCTTC-ACATTGTCGATGGTGTC 14110480 Query 33690 GCTTGAT-TCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCA 33748 | | | || || |||| ||||| ||||| ||||| || || || ||||||||||||| Sbjct 14110479 -CGAGCTCTCAACTTCAAGGGTGATAGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCA 14110421 Query 33749 TA 33750 || Sbjct 14110420 TA 14110419 Score = 105 bits (116), Expect = 4e-18 Identities = 150/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| ||||| || || ||||| | |||||| || | || |||||||| Sbjct 85489390 TGGAGAGTTGACTCCTTTTGAATATTATAATCTGCGAGTGTACGCCCATCTTCCAATTGC 85489331 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || ||||| |||| | ||||||||| | || | ||| || ||||| ||||||| Sbjct 85489330 TTCCCTGCAAATATCAGCCTCTGCTGATCCGGTGGAATACCCTCCTTGTCTTGAATTTTC 85489271 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTCCACGTCAACCGTGATCGTTTTACC 33722 || ||||| || | ||||| ||| ||| || || | ||||| ||||| || Sbjct 85489270 GCCTT-AACATTATCTATCGTGTC---TGAGTTTTCAACTTCCAGTGTGATGGTTTTTCC 85489215 Query 33723 TGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| ||||| |||||||||||||| Sbjct 85489214 AGTTAAGGTTTTAACAAAGATCTGCAT 85489188 Score = 105 bits (116), Expect = 4e-18 Identities = 150/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| ||||| ||||| ||||| | ||| || ||| | || || | |||| Sbjct 86551336 TGGAGAGTTGACTCCTTTTGAATGTTATAATCAGCGAGAGTCCGTCCATCCTCAAGTTGT 86551395 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| ||||| |||||||| || |||||| | || | |||||||||||| |||||| Sbjct 86551396 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTC 86551455 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTCCACGTCAACCGTGATCGTTTTACC 33722 | || ||||| ||| | |||| ||| || || || | || || || || || Sbjct 86551456 -GCTTTAACATTGTCGATCATGTC---TGAACTCTCAACTTCGAGAGTTATAGTCTTGCC 86551511 Query 33723 TGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || ||||||||||||||||| Sbjct 86551512 AGTAAGAGTCTTTACAAAGATCTGCAT 86551538 Score = 104 bits (114), Expect = 2e-17 Identities = 165/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | |||||| | || | || || ||| ||| ||||| |||||||| || | Sbjct 14109963 ACCACCACGCAAACGGAGAACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 14109904 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| ||||| ||||| ||||| | |||||||| | || Sbjct 14109903 AAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTTTGCTGATCCGGAGG 14109844 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGAT---T 33697 | ||||| ||||| ||| || || | ||||| ||| ||||| ||| | Sbjct 14109843 AATGCCTTCCTTGTCCTGAATCTT-TGCCTTAACATTATCAATTGTGTC---TGAGCTCT 14109788 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | ||||| || || |||||||| ||||||||||||||||||||| Sbjct 14109787 CAACCTCGAGAGTGATAGTCTTCCCTGTTAAAGTTTTTACAAAGATCTGCATA 14109735 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 33548 GTAGAGTGCT--CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 || ||||| | ||| ||||| ||||| || || | || || | |||| |||||||| Sbjct 85490303 GTGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCGTCTTCCAATTG 85490244 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| || |||||||||| | ||||||||| | || | ||||| ||||| |||||| Sbjct 85490243 TTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGAATTTT 85490184 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTGATCGTTTTACCT 33723 | | ||||| ||| | ||||| | | | || || || | |||||| ||||| || Sbjct 85490183 -GGCCTTAACATTGTCTATCGTGTC-CGAGCTCTCAACTTCCAACGTGATTGTTTTTCCA 85490126 Query 33724 GTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || || |||||||| ||||| Sbjct 85490125 GTTAAGGTCTTAACAAAGATTTGCAT 85490100 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| | | ||||| ||| |||||| || || || || ||||| || | Sbjct 14110191 ACCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGC 14110132 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| ||||| || || ||||| | |||||||||| | || Sbjct 14110131 AAGGGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGG 14110072 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | |||||||| || ||||| ||| | ||| |||| || ||| || | Sbjct 14110071 AATGCCTTCTTTATCCTGGATTTTAGCTTTGA-CATTGTCAATTGTATCGGAACTCTCAA 14110013 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || ||||| || ||||||||||||||||||||| Sbjct 14110012 CCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCATA 14109963 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| || || ||||| | || || | | | || ||||||||||| || |||||| Sbjct 85490062 TCCTTTTGAATATTATAATCTGCAAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAA 85490003 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| | |||||| ||| | || | ||| || || || || || ||| |||| Sbjct 85490002 ATCAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTC-ACATT 85489944 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||| || ||||| || | ||||||||| || || || ||||| || || Sbjct 85489943 GTCAATGGTATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCAC 85489884 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 85489883 AAAGATCTGCAT 85489872 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| || | ||||||||| || || || || || ||||||||||| | Sbjct 14110419 ACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGC 14110360 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | | || || | || || || |||||||| | | |||||| || | || Sbjct 14110359 TAAAGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGG 14110300 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCC 33699 | ||||| || || |||||| || | |||| ||| | |||||| | | | || Sbjct 14110299 AATCCCTTCCTTATCTTGAATTTT-TGCCTTCACATTGTCGATGGTGTC-CGAGCTCTCA 14110242 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| || || ||||| || || || ||||| |||||||| |||||| Sbjct 14110241 ACTTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCATA 14110191 >seq6 Length=97571839 Score = 114 bits (126), Expect = 8e-21 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | ||| |||||| || || || ||||| ||||| | ||||| || | Sbjct 19649548 ACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATGTTATAATCAGTCAGTGTTCGACC 19649489 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || || | ||||||||| |||||||| || | || |||||| | || | |||||||| Sbjct 19649488 ATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGAATTCCTTCTTT 19649429 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| |||||| ||||| ||||| ||| | |||||| | || || |||| || | Sbjct 19649428 GTCTTGAATTTT-TGTTTTAACATTGTCAATGGTGTCACAGCTCTCAACCTCAAGTGTAA 19649370 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || ||||| | || || |||||||| ||||| Sbjct 19649369 TGGTCTTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 19649333 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | ||| || ||| || ||||| || |||||||| | ||||| || | Sbjct 19666987 ACGCAACACAAGATGGAGTGTGGATTCCTTTTGAATATTGTAATCAGCAAGTGTTCGACC 19666928 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| ||||||||| ||||||||||| | || || ||| | || | ||||| || Sbjct 19666927 ATCTTCCAGTTGTTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGAATTCCTTCCTT 19666868 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 ||| ||| || ||||| ||||| ||| | |||||| Sbjct 19666867 GTCTTGAATCTT-TGTTTTAACATTGTCAATGGTGTC 19666832 >seq2 Length=96359640 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||||||||| |||||| ||| || || ||||||||||| | Sbjct 95422862 CACCACCACGGAGACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAG 95422803 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || | || || | ||||||||||| ||||| | | |||||| || | | Sbjct 95422802 CTAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATGAGCCTCTGCTGGTCCGGTG 95422743 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| || || || | || | ||| | |||||| ||||| Sbjct 95422742 GGATGCCTTCCTTGTCCTGGATCTT-TGCCTTCACGTTGTCGATTGTGTCGGAGGATTCG 95422684 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || ||||| || | ||||| || ||||||||||| Sbjct 95422683 ACCTCAAGGGTGATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCAT 95422634 >seq854 Length=364260 Score = 104 bits (114), Expect = 2e-17 Identities = 169/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||| | || | || || ||| |||||| || || Sbjct 69507 AAAATCTGCATGCCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATA 69448 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| |||| || ||||| | || || | || ||||| ||||||||||| | |||| Sbjct 69447 TTGTAGTCGGCAAGAGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGC 69388 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||||| ||||| || ||| | | ||||| ||| | |||||| Sbjct 69387 TGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTC-GACTTAACATTGTCAATGGTGTC 69329 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || |||| ||||| || || || || || ||||||||||| |||||||| Sbjct 69328 GGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCGGTCAATGTTTTTACAAAAATCTGCAT 69269 Score = 104 bits (114), Expect = 2e-17 Identities = 169/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||| | || | || || ||| ||| || || ||| Sbjct 69735 AAAATCTGCATCCCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATG 69676 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| |||| || ||||| | || || | || ||||| ||||| ||||| | |||| Sbjct 69675 TTGTAGTCGGCAAGAGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGC 69616 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 |||||| | || | ||||||||||| || ||| | | ||||| ||| | |||||| Sbjct 69615 TGATCTGGAGGGATGCCTTCTTTGTCCTGGATCTTC-GCCTTAACATTGTCAATGGTGTC 69557 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || |||| ||||| || || || || || ||||| ||||| |||||||| Sbjct 69556 GGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGTCAAAGTTTTCACAAAAATCTGCAT 69497 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||||||||| ||||||||| || ||| |||||| || || || ||||| | Sbjct 70179 CCTCCCCTCAAACGTAGCACCAAATGCAGTGTGGACTCTTTCTGGATATTATAATCAGCA 70120 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | || || || ||||| ||||| |||||||||||| |||| Sbjct 70119 AGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGA 70060 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || || ||| | | |||| || | || || ||| || Sbjct 70059 ATCCCTTCTTTATCTTGGATCTTC-GCCTTTACATTATCAATTGTATCAGAACTTTCAAC 70001 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || ||||| | || || ||||||||||||||| Sbjct 70000 CTCCAAGGTGATTGTCTTCCCTGTCAGTGTCTTCACAAAGATCTGCATA 69952 >seq1629 Length=244661 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||||||| || |||||||| ||||| ||| || || ||||| || || | Sbjct 134827 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGCA 134768 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | |||| ||||| ||||| || ||||| |||||||||||||| ||| |||| Sbjct 134767 AGAGTCCTGCCGTCCTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 134708 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || || || || |||| ||| | ||| || || || Sbjct 134707 ATACCCTCCTTGTCTTGGATCTT-TGCTTTGACATTGTCAATGGTATCAGAACTCTCAAC 134649 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || || || || || || || || ||||| |||||||| Sbjct 134648 CTCCAAAGTTATTGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 134601 Score = 100 bits (110), Expect = 2e-16 Identities = 171/243 (70%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||| | ||| | || | || || || |||||| || ||| Sbjct 134611 AAAATCTGCATGCCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGACTCTTTCTGAATG 134552 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | | ||| | |||| || | ||| || |||||||| |||| | |||| Sbjct 134551 TTGTAATCTGCCAATGTCCTCCCGTCCTCAAGTTGCTTCCCGGCAAAGATCAGTCTCTGC 134492 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | |||||| ||||| || || || || ||||| ||| | ||| || Sbjct 134491 TGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTT-TGCTTTAACATTGTCGATGGTATC 134433 Query 33690 GCTTGA---TTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 ||| ||| || |||| ||||| || || || || | ||| || ||||||||||| Sbjct 134432 ---TGAACTTTCAACTTCAAGGGTGATTGTCTTGCCGGTAAGCGTCTTGACAAAGATCTG 134376 Query 33747 CAT 33749 ||| Sbjct 134375 CAT 134373 >seq241 Length=672200 Score = 98.7 bits (108), Expect = 7e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||| | ||| ||||| ||| || || ||||||||||||| Sbjct 541857 CACCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGG 541798 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || | |||| || | || |||||||| ||||||| |||||| |||||| | | Sbjct 541797 CTAGGGTACAGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGTTGATCTGGGG 541738 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| || || || || |||| |||| ||| | |||||| ||||| Sbjct 541737 GAATCCCTTCCTTATCTTGGATCTTGGCTTTC-ACATTGTCGATTGTGTCGGAAGATTCA 541679 Query 33700 ACGTCAACCGTGATCGTTTTACC 33722 || |||| ||||| |||||||| Sbjct 541678 ACCTCAAGGGTGATTGTTTTACC 541656 >seq3 Length=72893213 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||| | ||| ||||| ||| || || ||||||||||||| Sbjct 72826984 CACCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGG 72826925 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || | || || | || |||| || ||||||| ||||||||||||| | | Sbjct 72826924 CTAGGGTACGGCCATCTTCAAGCTGCTTTCTGGTGAAAATCAGACGCTGCTGATCTGGGG 72826865 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC-GCTTGATTC 33698 | | ||||| || || || || |||| |||| ||| | ||||| | ||||| Sbjct 72826864 GAATCCCTTCCTTATCTTGGATCTTGGCTTTC-ACATTGTCGATTGTGTCTGGAAGATTC 72826806 Query 33699 CACGTCAACCGTGATCGTTTTACC 33722 || |||| ||||| |||||||| Sbjct 72826805 AACCTCAAGGGTGATTGTTTTACC 72826782 >seq8 Length=47755514 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || || ||| || || ||||||||||| | || || | |||| || Sbjct 5427312 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTGCCGTCTTCG 5427371 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || ||||||||||| ||||| | |||||| || | || | ||||| || || | Sbjct 5427372 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCCTTATCCTGA 5427431 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | | ||| | ||| | |||||| ||| || |||| ||||| ||||| Sbjct 5427432 ATCTT-AGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATTGTTTT 5427490 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| ||||| || |||||||||||| Sbjct 5427491 CCCAGTTAGGGTTTTGACGAAGATCTGCATA 5427521 >seq1591 Length=249109 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | ||| | ||||| || || || ||| || || || |||||||||| | Sbjct 28578 CCACCTCGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCGGCG 28519 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || | || || ||||| || || | | ||||||||| | || Sbjct 28518 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGATCTGGGGGA 28459 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| | || || | ||| | |||||| || || Sbjct 28458 ATTCCTTCTTTGTCCTGGATTTT-GGCTTTTACGTTGTCGATTGTGTCGGAACTCTCGAC 28400 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || |||| ||||| || ||||||||||| Sbjct 28399 CTCAAGAGTGATGGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 28352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328554997860480